Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00927 AACATTGCAGCACAAGGAATGGCAATGATGAAAGAGAATAGTATTATTGAAGTGAACCTTGGGAAGAGCCAAATGTCTATGGCAGAAGGTGAGTTCCAAGGAACAAGAGGTATCAAGAGACGACGAAGAGAGGTTGCAGCAGCAGCAGCAAGCAGGGGGGATGATAATCATCAGCAGAAGCTACCACAACAAGAAGTTGCTGAAAATTCTAAAATCAACACATCAAAGAGAAGCTCAAGATTTCGCGGTGTTAGCAGACATAGATGGACTGGTAGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACTCAAAAAAAGAAAGGGAAGCAAGGGGCTTACGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTGGCTGCACTTAAGTATTGGGGAACTTCAACTTTCACCAATTTTCCAATATCAGATTACGAGAAGGAGATAGAAATAATGCAGACCATGACCAAAGAGGAGTATTTGGCTACTTTAAGGAGAAAAAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGGGGTGTCGCAAGGCACCACCACAATGGTAGATGGGAGGCAAGAATAGGAAGGGTTTTCGGAAACAAATATCTCTACCTTGGCACCTACAGCACCCAAGAGGAAGCTGCGCGTGCTTATGACATAGCGGCCATTGAGTACAGAGGGATTCATGCTGTTACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTTCAGGAGGAAGCACCCCAGAAGCAAAACTCGAATCACATGCAGCACCAGAGTCTCAAAAGATAGCATCCCCATCTAACTATGCTCTAACAGAAGAGTCAAACTCTTTGGTCCTTCACAACAGTTTTTTCAGTCCCGATTCTCTGAATTCCCCTGTAATGCAAGACAATTTTGGAAACAAAATCCATCAATTCTCAAGCAATAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTACGCTCTTCGTTATTTAGAGAATTAGTTGAAAAGAATTCAAATGTATCTGGAGATGAAGCAGATGGTGAAGTCACATATGATCAACAGCCACAAATTGATTGTGATGATGATCTGGGTGGAATCTTCTATGATAGCATTGGTGATATCTCATTTGTCTGTGATCCCAACAGATACAACTTGGAATTGCAAGCAAGAGACCCGCACTCAATATTTTGA 1194 0.4204 NIAAQGMAMMKENSIIEVNLGKSQMSMAEGEFQGTRGIKRRRREVAAAAASRGDDNHQQKLPQQEVAENSKINTSKRSSRFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWLKPSGGSTPEAKLESHAAPESQKIASPSNYALTEESNSLVLHNSFFSPDSLNSPVMQDNFGNKIHQFSSNKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVTYDQQPQIDCDDDLGGIFYDSIGDISFVCDPNRYNLELQARDPHSIF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00927 397 MobiDBLite consensus disorder prediction 56 79 - -
Pste5g00927 397 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 302 - -
Pste5g00927 397 Pfam AP2 domain 178 229 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 Pfam AP2 domain 79 135 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 SMART rav1_2 80 149 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 SMART rav1_2 179 243 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 CDD AP2 79 145 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 MobiDBLite consensus disorder prediction 34 50 - -
Pste5g00927 397 ProSiteProfiles AP2/ERF domain profile. 80 143 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 CDD AP2 178 239 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 ProSiteProfiles AP2/ERF domain profile. 179 237 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 MobiDBLite consensus disorder prediction 31 79 - -
Pste5g00927 397 Gene3D AP2/ERF domain 79 145 IPR036955 GO:0003700|GO:0006355
Pste5g00927 397 Gene3D AP2/ERF domain 178 239 IPR036955 GO:0003700|GO:0006355
Pste5g00927 397 SUPERFAMILY DNA-binding domain 79 145 IPR016177 GO:0003677
Pste5g00927 397 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 PRINTS Ethylene responsive element binding protein signature 219 239 IPR001471 GO:0003700|GO:0006355
Pste5g00927 397 FunFam AP2-like ethylene-responsive transcription factor 178 239 - -
Pste5g00927 397 SUPERFAMILY DNA-binding domain 178 239 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00927 Pste-Chr5 6049145 6051174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00927 76 280 AP2-EREBP Transcription Factor Family AT5G57390 59.624 6.06e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pste5g00927 AP2 1.8e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00927 5 6049145 6051174 Pste5g00927 5 6049145 6051174 ECH