Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00925 GGATATCCTACTCCTCCAAAAAACAACATTTTCTCAATTTATTCATTTAATTATTCATGGTGTGGGCCCACCTGCCATGTCTTTCCTTGCACTCTGCTAATTCAGCGACAGCAGAACGAAATTCATATTATATAGCAGAATCGCAGAGTGCAGCACCCCACAAGCAGCAACGATGGTCAATACGGCAATGGTATTCGCTGTTTTGGTAGCGGCGATTTGGGTTGCGGAATCAGAGTACATAGAGTACAACACCACGCAGACCATAGTCGCAGACAAAATAAACGTGCATTTGGTACCTCACTCCCACGACGATGTTGGATGGCTCAAGACCGTCGATCAGTACTACGTTGGAGCCAACAACTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTCTGCATTTTTCCAGAGATGGTGGAGACAGCAGAGTAAAGCAATGAAGATTAAAGTCAAGGAGCTTGTCAACTTGGGTCAGTTGGAATTCATAAATGGGGGTATGTGTATGCATGATGAAGCCACCCCGCATTACATTGATCTAATTGACCAGACCACTCTTGGGCATCAATTTATCAAAGAGGAATTTGGTAAGGTTCCAAGAGTTGGTTGGCAGATTGACCCATTTGGCCATTCAGCAGTTCAGGCTTACTTGCTTGGTGCTGAGCTAGGATTTGATTCACTCTTTTTTGCTAGAATTGATTACCAAGATAGAGCCAAGCGATTAAAGGAGAAGACTCTTGAGGTTATTTGGCAGGGTTCCAGGTCTCTTGGCTCTTCTTCGCAAATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTCACATTTGAAATAAATGATGTTTCCCCTCCTATTCAGGATGACATTCAACTATTTGACTATAATGTTCAAGAAAGGGTCAACGATTTTGTATCTGCTGCGTTAGCTCAGGCTAATGTGACCAAAACAAATCACATTATGTGGGCAATGGGGACAGACTTCCGTTATCAATATGCTAATTCATGGTTCAGGCAGATGGATAAATTTATTCATTACGTCAATCAGGATGGACGTGTCAATGCATTATATTCAACACCATCTATATACACTGATGCAAAATATGCAGCTAATGAGTATTGGCCTCTTAAAGTTGATGATTTTTTCCCGTATGCAGATCACCCAAATGCATATTGGACTGGATATTTTACAAGTAGACCAGGTTTGAAGGGCTATGTGAGAGTGATGAGTGCTTACTATCAGGCAGCAAGGCAATTGGAATATTTTAAAGGGAGGAATGAAACAGGACCAAATACCAATGCATTAGCCGACGCTTTAGCAATTGCTCAGCACCATGATGCAGTTAGTGGCACAGAAAGGCAGCATGTTGCTTCTGATTATGCATTGCGACTGTCAATTGGATATGCAGAGGCAGAAAGGTTGGTTGCATCTGCACTTGCTTCTTTGGTAAAACAAAGATTAAGTTCGCATAGGTGTCCTCTTCTTAATATAAGTTATTGTCCTCCATCAGAAGCTACGATTGTGACTGGAAAGAACTTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAAGAGGGAAGATGTAATTCGAATTCCTGTTTCCACTGGACAGGTTTTTGTTAAGGATTTTGCTGGGAAGAAAATAGAATCTCAGCTTCTGCCTCTGTCTAATGCTACTTTGAATATGAGAAAGCATTATGTCAGAGTTTATTTAGGAAAATCTCCTGGGGGTGACAAACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACCTATATAGTGTCAAGCTCTAAAGAGTCAAGTCATAGTTCAACTATCTCAAAGATGTACAGATCAGAAGGAAGTACCAATAAAAGCATAGAAGTTGGACAAGGGAATCTAATGCTACTTTATTCAGCAGATGAAGGAAAACTGACTCAGTATGTTAACAGTAGAACTCTGGCTTCTGGGGCATATGTCTTTCGTCCAAATGGCTCGTTTCCTGTTAAATCAAATCATCAGGTATCTCTTACTGTCCTGCGTGGTCCAATATTGGATGAAGTACATCAACAACTCAATCCATGGGTATCCCAGATTACAAGGATATTCAAGGCAAAAGAGCATGCTGAAATTGAGTTCACAGTCGGGCCTATACCTGTGGATGATGGCATTGGGAAAGAAATTATTTCTCAATTTAAAACAACGATGAAGACCAACAAGACATTTTACACAGATTCTAATGGGCGTGACTTCATTAAGAGGATTCGAGATTTCAGAACAGATTGGGATCTACAAGTGAGCCAACCCATAGCTGGAAACTATTACCCAGTTAATTTAGGAATATATGTGCAAGATAGTAGTATGGAATTCTCAGTGTTGGTGGACCGCTCAGTTGGAGGTTCCAGCTTGGAAGATGGCCAAATGGAGCTGATGCTCCACAGGAGGTTGCTTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCGTTGCTGATAAGTGTGAGGGCTTAACGATTCAAGGGAAAATGTACCTTAGAATTGACCAAAAAGGTGAAGGAGCTAAGTGGCGTCGCACCATTGGCCAGGAGTTATATTCACCATTGCTGTTGGCCTTCACAGAACAGGATGGGGATAATAGGTTGCAATTTAGTCCATTAACATCGTCTGGCATAGATTCTTCCTACAGTTTACCCAACAACACTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGGAAAGTACTTGTACGGTTGGCTCACCTTTACGAGGTTATTAGAGAGGACAAAGATTACTCGGTAATGGCAAGTGTGGAATTGAAAAGGTTGTTTCCTAACAAGATGATAAATAAAGTGACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGCAGAAATGGAAAAGAGGAAGTTGGATTGGAAGGTACAAGGGTCCACTGAAGAACCAAAGGTGGTGAGGGGAGGACCTGTTGATCGTACGAAGTTGGTGGTTGAACTTGTTCCAATGGAGATTCGGACATTCTTAGTTGAATTTAATCCCCTCCAAACACGTCTAATGGCGAAAAAGCTGCTCTTTTTGTTGACCCTTTTGGAAATTCTCCTTTGTGGGCAATCCAAGTTTATGGTGTACAACACTTCCCAGGGCATAATTCCTGGGAAGCTCAATGTTCACCTGGTAGCTCACACCCACGATGATGTTGGTTGGTTGAAGACCGTTGATCAGTACTATGTTGGTTCTAACAATTCAATTCAGGGGGCTTGTGTGCAGAATGTGTTGGACTCCATGGTGCATGCTCTATTGGCTGACAAGAACAGAAAATTTATTTATGTTGAGATGGCCTTTTTCACCCGGTGGTGGAGAGATCAAAGTAAAGCTGTTCAGGATGTAGTTAAGAAATTCATTAGTTCGGGTCAACTTGAGTTCATAAATGGTGCCATGTCTATGCATGATGAGGCAGTAACACATTACATAGACATGATTGATCAGACTACACTTGGACATAAATTTCTAAAAGAGGAATTTGATGTGACTCCTAGAATTGGTTGGCAAATTGATCCTTTTGGACATTCTGCTGTGCAGGCTTACCTTTTGGGAGCTGAAGTTGGGTTTGACTCGCTTTTCTTTGGTCGGATAGATTACCAAGATAGGGCTAAGCGCAAAAAGGAGAAGAGTCTTGAGGTTATCTGGCAGGGTAGCAAGAGCCTTGGTTCATCTGCCCAGATCTTTGCTGGAGCATTCCCTCAAAATTATGAGCCACCTTCAGGATTTTACTTTGAAGTTAATGATAACTCATTAATAGTTCAAGATAACATGGAATTGTTTGATTATAATGTCCAAGATCGAGTGAATGACTTTGTTTCTGCTGCTTTATTGCAGGCAAACATAACTCGAACAAATCACATAATGTGGACAATGGGAACTGATTTTAAGTATCAATATGCAGAAACATGGTTCCGACAACTGGACAAGCTTATTCATTATGTAAATGAGGATGGACGTGTCAATGCTTTGTACTCTACACCATCCATATATACTGATGCAAAATATGCTACAAATGAGTACTGGCCAATCAAGACTCATGATTTTTTCCCTTATGCAGACCGTGCAAATGCTTACTGGACAGGATACTTTACCAGTAGACCAGCTATCAAACGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAATTTTTCAGGGGGAGAATGAATTCAGGCCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCCCAACACCATGATGCAGTCACTGGCACAGAAAAGCAACATGTGGCCAATGATTATTCTAAACGATTGTCGATAGGCTACATGAAGGCAGAGGAATTGGTTTCATCATCTCTGGCTTGCTTGGTTGAGTCACCGTTACTTACTAGATGTCAAAGCCCAGTTACAAAGTTTCAACAATGTCCACTTTTGAACATAAGTTACTGTCCTGCATCAGAAGTTGATCTGGTTCAAGGAAAGAATTTGGTTATTGTGGTTTACAATTCTCTAGGTTGGAGGAGGAATGAAGTGATTCGGATTCCGGTTACAGAGGTCAATGTTAGAGTTCATGACTCTAATGGTATAGAAATAGAATCTCAACTTCTTCCTCAGGCTGAGAAATATGTAGACTTAAGAAACTACTATGTGAAGGCATATTTGGGACGAACTCCACCCAAGACACCTAAGTATTGGCTTGCATTTACAGTTTCTGTACCACCACTTGGTTTTACCACGTACACTGTCTCAACTGCCAAAAGAACAGGGTCCACTAGATCATCAGTAGATACATATAAAAGTAGTGAAAAGTCTAAATTTGAAGTTGGTCAAGGAAATTTGAAGCTTAAATTCTCTACGGTTCAAGAGAAGTCTACCAATTATGTTAATATAAGAAACCTGGTTGAGGAGCAGGTTGAACTAAGTTATCTTTATTATTCTGGTTACAACGGAACTCATCAAAAAGATCCACAGAATTCTGGTGCCTATATCTTCCGTCCAAATGGCTCATATCCCATAACCCATGAAAAAAAGGTCCCATTGACTGTTTTGCAAGGACCGGTGCTAGATGAAGTGCATCAACAAATCAATCCATGGATATATCAGATTACCAGACTATACAAAGGAAAGGAACACGTTGAAGTGGAGTTTATTGTTGGTCCTATACCAGTTGAAGATGGAATTGGTAAAGAAGTTTCAGCTCAGATTTCAACTACTATGGAAACCAACAAAACATTTTACACTGATTCTAATGGGCGTGATTTTATCAAAAGGATTCGTGACTACAGAACAGACTGGGACCTGGAAGTGAACCAACCTGCTGCTGGAAATTATTACCCTATTAATCTAGGGATATACATAGAGAATGATAAAACAGAATTCTCAGTTTTGGTGGATAGAGCTATTGGAGGATCCAGCTTACAAGATGGACAAATAGAGCTGATGGTCCACAGGAGATTACTACTTGATGATTCAAGAGGTGTTGCAGAGGCTCTAAATGAAACAGATTGTGTTGGTGATGATTGCAGGGGTCTAACTGTCCAAGGTAAATTTTACTACAGAATAGATCCCTTGGGAGAGGGCGCTAAGTGGCGTCGTACTTTTGGCCAGGAAATATATTCTCCACTTCTGTTAGCCTTTGCTGAAAAGGATGATAAAGATGACTGGATGAATTCCCGTCTATTAACATTTTCTGGAATTGGTTCTTACACATTACCTGATAATATTGCCATTATAACATTACAGGAACTTGACAATGGAAAAGTTCTCCTTCGGTTAGCACATCTATATGAGATTGACGAGGACAAAGATCTATCTGTAATGGCAAGTGTGGAGCTGAAAAAGCTCTTCCCTGGGAGGAAGATCAAGGAGCTGAAGGAGATGAACTTATCTGCCAATCAAGAAAGGACAGAGATGGAGGGAAAAAGACTTGCATGGAAAGTAGAAGGCTCTTCTGAAAACAGACATGTTTCAAGGGGAGGGCCAGTTGATCCAAAAGAGCTAAACGTTGAGCTTGCTCCAATGGAAATCCGCACTTTTATAATTGACTTTGATCATGTGTCTAACCAGCTTTTTGCTGCACTGTAGATCAAAACCACTAGTTGAAGTCCATGCTTCTGGACAAGCATATTGGTATGTCTATATAACAAGTTCAGCTGGCCATGATAACCTGTACTAAGAACGTTTCAAATACTGGTATGTTTTGCATAATATCATATCCTTAATTGTAGTTTTCACATAACATGTCCACCAAACATACAACCATATAAAG 6302 0.4073 MVNTAMVFAVLVAAIWVAESEYIEYNTTQTIVADKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSAFFQRWWRQQSKAMKIKVKELVNLGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKEEFGKVPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVIWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDIQLFDYNVQERVNDFVSAALAQANVTKTNHIMWAMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEYWPLKVDDFFPYADHPNAYWTGYFTSRPGLKGYVRVMSAYYQAARQLEYFKGRNETGPNTNALADALAIAQHHDAVSGTERQHVASDYALRLSIGYAEAERLVASALASLVKQRLSSHRCPLLNISYCPPSEATIVTGKNLVIVVYNPLAWKREDVIRIPVSTGQVFVKDFAGKKIESQLLPLSNATLNMRKHYVRVYLGKSPGGDKLKYWLAFPVSVPPLGFSTYIVSSSKESSHSSTISKMYRSEGSTNKSIEVGQGNLMLLYSADEGKLTQYVNSRTLASGAYVFRPNGSFPVKSNHQVSLTVLRGPILDEVHQQLNPWVSQITRIFKAKEHAEIEFTVGPIPVDDGIGKEIISQFKTTMKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVSQPIAGNYYPVNLGIYVQDSSMEFSVLVDRSVGGSSLEDGQMELMLHRRLLHDDARGVGEVLNETVCVADKCEGLTIQGKMYLRIDQKGEGAKWRRTIGQELYSPLLLAFTEQDGDNRLQFSPLTSSGIDSSYSLPNNTALLTLQEFKNGKVLVRLAHLYEVIREDKDYSVMASVELKRLFPNKMINKVTEMSLSANQERAEMEKRKLDWKVQGSTEEPKVVRGGPVDRTKLVVELVPMEIRTFLVEFNPLQTRLMAKKLLFLLTLLEILLCGQSKFMVYNTSQGIIPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEMAFFTRWWRDQSKAVQDVVKKFISSGQLEFINGAMSMHDEAVTHYIDMIDQTTLGHKFLKEEFDVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRAKRKKEKSLEVIWQGSKSLGSSAQIFAGAFPQNYEPPSGFYFEVNDNSLIVQDNMELFDYNVQDRVNDFVSAALLQANITRTNHIMWTMGTDFKYQYAETWFRQLDKLIHYVNEDGRVNALYSTPSIYTDAKYATNEYWPIKTHDFFPYADRANAYWTGYFTSRPAIKRYVRLMSGYYLAARQLEFFRGRMNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYSKRLSIGYMKAEELVSSSLACLVESPLLTRCQSPVTKFQQCPLLNISYCPASEVDLVQGKNLVIVVYNSLGWRRNEVIRIPVTEVNVRVHDSNGIEIESQLLPQAEKYVDLRNYYVKAYLGRTPPKTPKYWLAFTVSVPPLGFTTYTVSTAKRTGSTRSSVDTYKSSEKSKFEVGQGNLKLKFSTVQEKSTNYVNIRNLVEEQVELSYLYYSGYNGTHQKDPQNSGAYIFRPNGSYPITHEKKVPLTVLQGPVLDEVHQQINPWIYQITRLYKGKEHVEVEFIVGPIPVEDGIGKEVSAQISTTMETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNQPAAGNYYPINLGIYIENDKTEFSVLVDRAIGGSSLQDGQIELMVHRRLLLDDSRGVAEALNETDCVGDDCRGLTVQGKFYYRIDPLGEGAKWRRTFGQEIYSPLLLAFAEKDDKDDWMNSRLLTFSGIGSYTLPDNIAIITLQELDNGKVLLRLAHLYEIDEDKDLSVMASVELKKLFPGRKIKELKEMNLSANQERTEMEGKRLAWKVEGSSENRHVSRGGPVDPKELNVELAPMEIRTFIIDFDHVSNQLFAAL 1981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00925 1981 Gene3D Glycoside hydrolase family 38, central domain 1282 1360 IPR037094 GO:0004559|GO:0006013
Pste5g00925 1981 Gene3D Glycoside hydrolase family 38, central domain 299 377 IPR037094 GO:0004559|GO:0006013
Pste5g00925 1981 Gene3D - 1438 1560 IPR013780 -
Pste5g00925 1981 Gene3D - 546 814 - -
Pste5g00925 1981 Gene3D - 1561 1827 - -
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 N-terminal domain 1002 1313 IPR000602 GO:0004559|GO:0006013
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 330 IPR000602 GO:0004559|GO:0006013
Pste5g00925 1981 FunFam Alpha-mannosidase 297 377 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 1561 1827 - -
Pste5g00925 1981 Gene3D - 436 545 IPR013780 -
Pste5g00925 1981 FunFam Alpha-mannosidase 554 813 - -
Pste5g00925 1981 SUPERFAMILY Families 57/38 glycoside transferase middle domain 334 428 IPR028995 -
Pste5g00925 1981 Gene3D - 835 960 - -
Pste5g00925 1981 Gene3D - 1848 1975 - -
Pste5g00925 1981 Gene3D Glycoside hydrolase 38, N terminal domain 36 298 IPR027291 -
Pste5g00925 1981 Gene3D Glycoside hydrolase 38, N terminal domain 1001 1281 IPR027291 -
Pste5g00925 1981 SUPERFAMILY Families 57/38 glycoside transferase middle domain 1317 1411 IPR028995 -
Pste5g00925 1981 FunFam Alpha-mannosidase 36 298 - -
Pste5g00925 1981 CDD GH38N_AMII_LAM_like 1001 1276 - -
Pste5g00925 1981 SMART Alpha_mann_mid_2 335 409 IPR015341 GO:0004559|GO:0006013
Pste5g00925 1981 SMART Alpha_mann_mid_2 1318 1392 IPR015341 GO:0004559|GO:0006013
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 C-terminal domain 554 766 IPR011682 GO:0004559|GO:0006013
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 C-terminal domain 1580 1779 IPR011682 GO:0004559|GO:0006013
Pste5g00925 1981 Pfam Alpha mannosidase middle domain 335 427 IPR015341 GO:0004559|GO:0006013
Pste5g00925 1981 Pfam Alpha mannosidase middle domain 1318 1410 IPR015341 GO:0004559|GO:0006013
Pste5g00925 1981 SUPERFAMILY Glycoside hydrolase/deacetylase 990 1314 IPR011330 GO:0005975
Pste5g00925 1981 SUPERFAMILY Galactose mutarotase-like 1417 1970 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pste5g00925 1981 FunFam Alpha-mannosidase 1361 1415 - -
Pste5g00925 1981 SUPERFAMILY Galactose mutarotase-like 432 958 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pste5g00925 1981 SUPERFAMILY Glycoside hydrolase/deacetylase 25 333 IPR011330 GO:0005975
Pste5g00925 1981 PANTHER ALPHA-MANNOSIDASE 971 1972 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 446 572 - -
Pste5g00925 1981 Gene3D Glycoside hydrolase family 38, central domain 378 433 IPR037094 GO:0004559|GO:0006013
Pste5g00925 1981 Gene3D Glycoside hydrolase family 38, central domain 1361 1414 IPR037094 GO:0004559|GO:0006013
Pste5g00925 1981 FunFam Alpha-mannosidase 834 960 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 1001 1281 - -
Pste5g00925 1981 CDD GH38N_AMII_LAM_like 36 294 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 1438 1562 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 1280 1360 - -
Pste5g00925 1981 FunFam Alpha-mannosidase 1848 1972 - -
Pste5g00925 1981 Coils Coil 1908 1928 - -
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 1861 1967 IPR041147 -
Pste5g00925 1981 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 849 955 IPR041147 -
Pste5g00925 1981 FunFam Alpha-mannosidase 378 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00925 Pste-Chr5 6023399 6059964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00925 6 871 Glycoside Hydrolase AT5G13980 63.874 0.0 1221