Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00910 ATGGCTTTGCCAATTTCCAGTTATACGGTGGTGGGAGCTTGGTACAGTATACTCATTATCTGTTGGACTTGTTTCAACATTGCAATGGCGTCATATGAATCATCACTACATGTAGAAGCACAAGCTCTTCTGGAAAGTGAGTGGTGGAGTGGTTACACTAATCATCTTCCTTCTCGTTGCTACTGGCCAGGCATTACATGCAACAATGCTGGAAGTATCACAAACATTACTTTGCCTGCTGGACTCCAATTGGGAAACAAGTTGGGGAGATTCAACTTCTCTTGCTTCCCAAATCTTGTCCACCTCAACCTTGCTGAACACGGAATCACAGGAAACATTCCATATGGACTAGGTACCCTTTCCAAACTCATTCATCTTGACTTGTCCTCTAATGATATAGAGGGAACTATACCATCAGATATCTGGAATCTGAGGAATCTGGTAACACTCAATTTGGCTAGCAACAAGCTTAATGGCTCAATTCCGTCTACTGTGGGTCAGTTGACTAAGATCAACTCTTTGTTTCTTAACAACAATCAGATTAGCGGGTTTATGCCTGTGGAGTTAGGAAAAATGAGGAATCTGATTCAATTGGGTTTAAGTAATAATAGTTTTATTGGTTCAATACCTTTGGACCTCGGTCTATTGAACAATTTGAAATTTTTGTCCCTCAGTTGGAACAAATTAAATGGATCCATACCTTTGGATATAGCGAATTTGAACAACCTTGTGGTTTTAGATCTTAATACTAACAATCTCACGGGTGAAATACTTTCAGTCTTACATAATCTTACCAATTTGACAGACCTAAACTTGTCCAACAATATGATCTCTGACATGATCCCACGAAAGCTTATCCAGTTGACCAAATTGAAGTATCTGCGTATTTCAAATAACAAAATTTTTGGTGCAATACCAGATGACATTGGAAAACTTACTAAACTCTTGGTTCTAGACATGTCAAAAAACATGTTGACAGGAGAAATCCCAGTCAGTATCTGTAGTTGCTCTAACCTGCAGGAGTTAATCTTGAACCATAACAATATAATAGGAAACATTCCATCTGATATCGGTGACCTTGTTTCACTTTTTGTAATTGATCTGAGTCATAACTCAATCAAAGGAGAAATACCTTCACAACTTGGGAATGTGAAACACACTAGGATCTTGAATCTCAGTTATAACGAACTAACTGGAACTATTCCTAGTTCCCTAGTTTCACTGGGGAAGGTAAACTTGTCATACAATTCTCTAGAGGGTGAAATCCCTTTTGCTCTCCAAAAATCTTTGCCACCTGATGCATTCAGAGGCAATGAGAATTTGTGTGGCCGAACCACCCCTTTTCCTTATTGTTATTCCTCTCCTCACAAGCCAAATAATAGAGATTTGGTAGTGGCAATGAAGATTTTCCTTCCTCCCACAGCTTTGCTTGCTCTTCTATGCTCTGCATATGTGTTCCTTCGCTGGTGTAAGGCTGGGAATTGCATGTCTGTATCAAAAGAAACAAAGAATGGTGACATGTTTTCAATGTGGAACTATGATGGTAAAATTGCATACAAAGACATAATTGAAGCAACAGAGGGTTTTGACATCAAATATATAATAGGGGAAGGTGGTTATGGTAGTGTCTACAAAGCACAGCTACCTAGTGGTAGAGTAGTTGCCCTGAAGAAACTCCACAATTTAGCAGCCAATGAACCAGCAATCTACAGGATTTTCAAGAATGAAGTAAGAATCTTGACAAGGATAAGGCATAAAAATATTGTGAAGCATTACGGATTTTGCTTGCACAACAGATGCACGTTTTTGGTTTTGGAATACGTGGAGAGGGGAAGCTTGTATTGTGTTCTCCGCAATGACATTGAAGCCATGGAGTTGGATTGGACCAAGAGGGTCAACATTGTGAAAGGCATAGCACATAGTTTGTCATACCTTCACCATGATTGCCAGCCTGCAATTGTTCATAGAGATGTAACAACCAAAAATGTACTCCTGAATTTGGAAATGGAGGGTTGTCTCTCTGACTTTGGCATAGCCAGACTTCTAAACTTTGGTTCCTTCAATAGAACAGTACTTGCCGGCACTTATGGATATATTGCACCAGAGCTTGCCTATAGCGATCGTGTGACTCAGAAATGTGATGTCTACAGCTTTGGAGTGGTTGCACTTGAAATTATCATGGGTAAACATCCAGGAGATCTTGTTTCCTTATTCAGCACTGCATCCTCACAAGGCATTCTCCTCAAAGACATCTTAGACCCCCGATTAATATCCACCATCAATCTACAATCTGCTCAGAGTTTAGCTCTAATAGCAACACTAGCCTTTGCATGTCTTCATTCTCAGCCAAGGCTTCGATCAACAATGCGACTACTATGTGACAAACTTGTCAAGGGAAATTCCCCATTAACTAAACCATTTGAGGAAATTTCAATAAAGCACATTGTAAATCAGGAATTGTAACTAGTTTCTTGGACATCATTCTCATACTTCTTTGAACTTCACAGGTAGTTTATATTTTCTGTTTCCTG 2531 0.3947 MALPISSYTVVGAWYSILIICWTCFNIAMASYESSLHVEAQALLESEWWSGYTNHLPSRCYWPGITCNNAGSITNITLPAGLQLGNKLGRFNFSCFPNLVHLNLAEHGITGNIPYGLGTLSKLIHLDLSSNDIEGTIPSDIWNLRNLVTLNLASNKLNGSIPSTVGQLTKINSLFLNNNQISGFMPVELGKMRNLIQLGLSNNSFIGSIPLDLGLLNNLKFLSLSWNKLNGSIPLDIANLNNLVVLDLNTNNLTGEILSVLHNLTNLTDLNLSNNMISDMIPRKLIQLTKLKYLRISNNKIFGAIPDDIGKLTKLLVLDMSKNMLTGEIPVSICSCSNLQELILNHNNIIGNIPSDIGDLVSLFVIDLSHNSIKGEIPSQLGNVKHTRILNLSYNELTGTIPSSLVSLGKVNLSYNSLEGEIPFALQKSLPPDAFRGNENLCGRTTPFPYCYSSPHKPNNRDLVVAMKIFLPPTALLALLCSAYVFLRWCKAGNCMSVSKETKNGDMFSMWNYDGKIAYKDIIEATEGFDIKYIIGEGGYGSVYKAQLPSGRVVALKKLHNLAANEPAIYRIFKNEVRILTRIRHKNIVKHYGFCLHNRCTFLVLEYVERGSLYCVLRNDIEAMELDWTKRVNIVKGIAHSLSYLHHDCQPAIVHRDVTTKNVLLNLEMEGCLSDFGIARLLNFGSFNRTVLAGTYGYIAPELAYSDRVTQKCDVYSFGVVALEIIMGKHPGDLVSLFSTASSQGILLKDILDPRLISTINLQSAQSLALIATLAFACLHSQPRLRSTMRLLCDKLVKGNSPLTKPFEEISIKHIVNQEL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00910 820 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 227 454 - -
Pste5g00910 820 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Pste5g00910 820 Pfam Leucine rich repeat 242 301 IPR001611 GO:0005515
Pste5g00910 820 Gene3D Ribonuclease Inhibitor 164 255 IPR032675 -
Pste5g00910 820 Gene3D Ribonuclease Inhibitor 351 451 IPR032675 -
Pste5g00910 820 Gene3D Ribonuclease Inhibitor 256 350 IPR032675 -
Pste5g00910 820 SUPERFAMILY L domain-like 288 428 - -
Pste5g00910 820 FunFam Leucine-rich repeat receptor-like protein kinase 608 805 - -
Pste5g00910 820 ProSiteProfiles Leucine-rich repeat profile. 266 289 IPR001611 GO:0005515
Pste5g00910 820 FunFam Leucine-rich repeat receptor protein kinase MSP1 493 607 - -
Pste5g00910 820 SUPERFAMILY RNI-like 90 331 - -
Pste5g00910 820 Gene3D Transferase(Phosphotransferase) domain 1 608 808 - -
Pste5g00910 820 ProSitePatterns Tyrosine protein kinases specific active-site signature. 653 665 IPR008266 GO:0004672|GO:0006468
Pste5g00910 820 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Pste5g00910 820 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 202 797 - -
Pste5g00910 820 Gene3D Ribonuclease Inhibitor 27 163 IPR032675 -
Pste5g00910 820 Gene3D Phosphorylase Kinase; domain 1 491 607 - -
Pste5g00910 820 SUPERFAMILY Protein kinase-like (PK-like) 507 794 IPR011009 -
Pste5g00910 820 FunFam Nuclear pore complex protein NUP107 26 187 - -
Pste5g00910 820 Pfam Protein kinase domain 532 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00910 820 SMART LRR_typ_2 144 168 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 120 143 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 360 384 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 264 288 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 312 336 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 405 437 IPR003591 -
Pste5g00910 820 SMART LRR_typ_2 216 240 IPR003591 -
Pste5g00910 820 SMART LRR_sd22_2 360 386 - -
Pste5g00910 820 SMART LRR_sd22_2 336 355 - -
Pste5g00910 820 SMART LRR_sd22_2 216 237 - -
Pste5g00910 820 SMART LRR_sd22_2 120 146 - -
Pste5g00910 820 SMART LRR_sd22_2 264 290 - -
Pste5g00910 820 SMART LRR_sd22_2 240 263 - -
Pste5g00910 820 SMART LRR_sd22_2 168 189 - -
Pste5g00910 820 ProSiteProfiles Protein kinase domain profile. 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00910 Pste-Chr5 5919644 5922312 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00910 96 701 Receptor kinase-like Gene Family AT4G08850 37.535 2.16e-136 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g00910 Pkinase 2.3e-41 CL0016