Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00904 GATTTGGTCTCCAAAATTTTTGGCGACCACCATCCTTGTTATTTATGGTATGATTGTTATGGGGATTGTATTGGAGTTAGAAGCAGCGCCAACAACATCGAAGCTTCGATCGGAGGCAATTGCTATAACCAATAGTGGATGGTGGAATTCGTCGCAGCAGTCAAATCCATACTTTATTTGCTCGATGAACTCGGGAACTAGCTTCGCAACTAACCCCGAGAAGGATAAAATAGCTCGACCGGTTAATCTATTCCAGCAAAATCTTTTTTATGTGAACATTTCTTTCAATGATTTGAAGGGTGGCATTCCAGATAGTTTCCCAGCGTCTGCAGTCATAGGCAACAAGGGTCTTTGTAGTGACATATCGTATGGTCAAACCAAATTCCTATTCCAGCCGTGTACAGCCCACCGCAACAACGGGAGGCAAAAACTGGTCATAATTCTTCCTATCATCATTTTTCTAATGGTTTCCTTCTTTCTACCTGTGTATATTAGACTTATTAGCATTGCAAACAAGAACAAACATGCAAAGACGACGGCCAGTAAGAATGGAGATTTGTTCTGTATATGGAACTATGATGGAAGCATAGCTTATGAAGACATCATCAGAGCAACTGAACACTTCGACTTGAAATATTGTATTGGAACAGGAGCATACGAGACTGTTTATAGAGCACAATTACCGAGTGGAAGGATTGCTGCTTTGAAAAAACTTCATGGCTTTGAAGCAGAGATGCCAGCATTTGATGAGAGTTTTAGAAATGAGGTCAAAGTATTATCAGAAATAAAGCATCGGAATATCGTGAAAATGTATGGATTTTGCTTGCACAAGAGAGTCATGTTTCTGATCTATGAATACATGGAGAAAGAAAGCTTGTTTGATGATGTAGAAGCAATGGAATTGGATTTGAAGAAAAGGGTTAACATAGTGAAAGGCAGTGCCCATGCTTTATCATATCTACATCATGACTGCAACCCTCCAATAGTGCATAGAGACATATCAGCCAGTAATGTTTTACTTAACTCAGAGTGGGAGCCTAGTGTTGGTGACTTCGGTACAGCCCGACTTCTCCAACATGATTCTTCTTATCGGACTATAGTTGCTGGAACCATTGGTATTGGCCTTGAAGCATTCGTGGGGAAACATCCTAAGGAAATACTATCGTGGCTCCAATCACAATCTAGTCATAGCATAAAATTATATGAAGTATTGGACCAGCGTCTCCCAGCACCAGATATGACAGTTTTTCTAGACATAGTTCGTGTTGTTCTAATAGCATTAGCATGCTTGAATCCCAATCCCCATGACCGACCAACAATGGAACATGTGTCACAATGTTTTCTGACTCAGATAACTCCATTGGTCGTTCCTTTACGTGAACTTTCGTTGCAGCAACTCATGAGTCAAGCTCGAATTATT 1420 0.4049 MIVMGIVLELEAAPTTSKLRSEAIAITNSGWWNSSQQSNPYFICSMNSGTSFATNPEKDKIARPVNLFQQNLFYVNISFNDLKGGIPDSFPASAVIGNKGLCSDISYGQTKFLFQPCTAHRNNGRQKLVIILPIIIFLMVSFFLPVYIRLISIANKNKHAKTTASKNGDLFCIWNYDGSIAYEDIIRATEHFDLKYCIGTGAYETVYRAQLPSGRIAALKKLHGFEAEMPAFDESFRNEVKVLSEIKHRNIVKMYGFCLHKRVMFLIYEYMEKESLFDDVEAMELDLKKRVNIVKGSAHALSYLHHDCNPPIVHRDISASNVLLNSEWEPSVGDFGTARLLQHDSSYRTIVAGTIGIGLEAFVGKHPKEILSWLQSQSSHSIKLYEVLDQRLPAPDMTVFLDIVRVVLIALACLNPNPHDRPTMEHVSQCFLTQITPLVVPLRELSLQQLMSQARII 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00904 457 ProSitePatterns Tyrosine protein kinases specific active-site signature. 312 324 IPR008266 GO:0004672|GO:0006468
Pste5g00904 457 SUPERFAMILY Protein kinase-like (PK-like) 175 430 IPR011009 -
Pste5g00904 457 PANTHER LEUCINE RICH REPEAT KINASE 2 70 434 - -
Pste5g00904 457 Pfam Protein kinase domain 197 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00904 457 ProSiteProfiles Protein kinase domain profile. 192 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00904 457 FunFam Leucine-rich repeat receptor protein kinase MSP1 155 270 - -
Pste5g00904 457 Gene3D Phosphorylase Kinase; domain 1 152 270 - -
Pste5g00904 457 FunFam Os07g0541700 protein 269 355 - -
Pste5g00904 457 Gene3D Transferase(Phosphotransferase) domain 1 271 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00904 Pste-Chr5 5879331 5886375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00904 72 356 Receptor kinase-like Gene Family AT4G08850 42.244 1.13e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g00904 Pkinase 1.1e-28 CL0016