Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00871 GAAAAAGAGAACTTTCGAGTGTTCAGTGAAGACGCAAACCGAACAGAACATAGTTGAGTGATGAGTTTTCAGCTATCAGGTTTATGGGTCACCAACTCTCCACCACTTTCCACGCACTTCGTTCCCAACCATGGCAGATTCTCCGCATCAGCTCTTTCTTCCCAATCCCCCACTATTCAGATAATTGGTGTGAGGGGCCCCAGTTGGAGGGAAAATGGATATGGCAATTCCAACAGCAACTTATTTGATGGGTGCCAAGGAGAGAGTGATCATTGGAGTGAGATTGACACTGATCTTTATCACTGGACAAAGGCATTGCGCCCTGTGCAGTGGTTTCCCGGTCATATTGCAAAAGCGGAAAAAGAACTTAAGGAGCAGCTCAAATTGATGGATGTTGTGATAGAGGTTCGGGATGGGCGAATTCCTATGTCCACTAGTCATCCGCAGATGGATCTATGGCTAGGAAATAGAAAGAGAATTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGACCGCAATGCTTGGGCAGATTATTTTGCTAGGAATGGCTCAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGGTACGATGAAGCTAGGTCGGTTAGCAAGGGAATTAGCAGCTGATGTAAATGTTAAGCGTAGAGCCAAAGGACTACTTCCTCGTGCTGTTCGAGCTGGAATAGTTGGATACCCTAATGTTGGAAAATCATCTTTGATTAATCGTTTGTTAAAGCGAAGAATGTGTCCAGCAGCTCCCAGGCCAGGAGTCACAAGAGAATTGAGGTGGGTACGTTTTGGGAAAGATCTTGAACTGCTGGATTCTCCTGGGATCCTGCCAATGCGAATCAGTGATCAGTCAGCTGCTATAAAACTTGCAATATGTGATGACATTGGAGAGAGGTCCTATGATGTGGCCGATGTTGCTGCAATTCTTGTGCAGATGCTTACAAAACTTCCCACAGTAGGCAGAGATGTTCTTTGTAAAAGATACAAGATTGATGTAGATAATCCAAGTGGTAAAATATTCACAGAGAAACTTGCAGTTCAATTATTTAATGGAGATGTTCATCAAGCAGCATTCCGCATCCTAGCAGATTTTAGAAAAGGCAAGTTTGGTTGGACTGCTCTGGAGAGGCCTCCTAGGTGAAGGTAGATGTTTGCTTTTAAAAGCAAAAGTCTGCGAAACTTGAATTGAAAATTACGGTAGAGACCTCCTGGAACTGACTGCAGAAGACAACTCCAAATGGTGTTATGTGAATGTGGATATTGTGATTATGAATGACATTATGGAAGAGAAAGGTGAATGGTTCCACAAGACACAACCTTTGGGGCCTTGACGTACAGAAAATAAAAGATTTGAAGCCATGGATGTTTCCTGTTATTACCCAGTAATTTGGTCTCATGCATACTGGTGTCTGTATACAACTAGTAGTGTATAGGTTGTAGTATATATGTATTTGTTAGTGAGATGTTTCTTAAAATTAGGGCTCATAAGGCCGAAGCAATAAGATGGCAAGACAATCAGAAAGTTACCTGTTTGTTAGTCTTTCTGGTAGCGGATGTAACCAAGGGATGAGGAAAAGTAACTTCAAATTTTTCAATCATTAAATTGTTAAAAAAAATATATTAAGGAGCCAAAATTTGTTATAAAATTACA 1668 0.4137 MSFQLSGLWVTNSPPLSTHFVPNHGRFSASALSSQSPTIQIIGVRGPSWRENGYGNSNSNLFDGCQGESDHWSEIDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWADYFARNGSKVVFSNGQLGMGTMKLGRLARELAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTKLPTVGRDVLCKRYKIDVDNPSGKIFTEKLAVQLFNGDVHQAAFRILADFRKGKFGWTALERPPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00871 365 Gene3D - 267 355 IPR023179 -
Pste5g00871 365 Pfam 50S ribosome-binding GTPase 209 296 IPR006073 GO:0005525
Pste5g00871 365 Gene3D - 89 262 IPR027417 -
Pste5g00871 365 FunFam Mitochondrial GTPase 1 267 355 - -
Pste5g00871 365 FunFam DAR GTPase 3 chloroplastic 89 262 - -
Pste5g00871 365 CDD YlqF 91 262 - -
Pste5g00871 365 NCBIfam ribosome biogenesis GTPase YlqF 89 361 IPR019991 -
Pste5g00871 365 PRINTS GTP1/OBG GTP-binding protein family signature 209 229 IPR006073 GO:0005525
Pste5g00871 365 PRINTS GTP1/OBG GTP-binding protein family signature 255 270 IPR006073 GO:0005525
Pste5g00871 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 330 IPR027417 -
Pste5g00871 365 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 77 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00871 Pste-Chr5 5551010 5555543 Dispersed