Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00867 ATGAAATTTGAGCGGGATGACGATGACGTAATTGAAATGTCAGGCAAGAATTCATGCAAACATAGAGATCATATTTCTGAGATATACACAACAATGGACGGGACCAGCCAAAACACGTTAACCTTCATCACTAGCACCATTGAGGCACCAAATTCTACCTCCCCTGAGGTTTCATCATCACCCCGTCTTTCTCTTTCAACAATTTCACAAGCTTACCCTCCTGGCTTTCCCAGAAAGGTATTTGCAGAGGTTATAGGGACATTTCTATTGGTGTTTGTAGGGAGTGGTTCAGCAGGTCTGAGTGTAATAGATGAAACAAGGGTGTCAAAGCTTGGAGCATCAATTGCGGGAGGACTCATAGTGACAGTGATGATTTACTCAATTGGACACATATCTGGGGCACACATGAACCCAGCGGTTTCGCTTGCTTTTTCCGCTGTTAGGCATCTTCCATGGCCACAGCTCCCATTTTATGTAGCAGCTCAACTCACTGGAGCAATTTCTGCTTCATACACATTGCGAGAGCTATTAGAGCCATCACATGAGATTGGACAAACGTCACCTGCTGGATCACATATTCAAGCACTAATCATGGAAACGGTGACCACATACACCATGGTGTTCATTTCCATGGCCGTAGCCACTGACAGAAACGCTACAGGACAGCTATCAGGAGTAGCAGTGGGTTGTTCTGTTTGCATAGCAAGTATCGTTGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCCATTTCATCCTACAAGGGACTTTGGTTATATTTTGTTGGACCGATTACTGGGGCAGTCTTAGCAGCATGGTCTTACAATGTGATTAGAGACACGGAACACCCTGGTTTTCCATTTTCACTGTCCTCCCTCTCATTCAAGATACGCCAAAGCATTAGTGGAACTGAAAAAGTTGGTCAAAGAGGCCACCAATGCTTGGTGTGAAACAATTTGCTCACCGCTCTGATCAATACATCATCATTGTTCAATGTCTTGTCTTGGAGGATCATCTCAATTAACTTCCACATGTACAATGTATATCGATAATACCCTACCAGTTCAAATGGTATTATTAGCTTCGCCATGTATCAACTTACAGGGTTATGATCCCATGTATAATGCAAATCTCTGTATTGTGTTTATCCTACATTAATGAATGAAATGTCAGTTTCATCTTTCTTGATCATTAA 1220 0.4295 MKFERDDDDVIEMSGKNSCKHRDHISEIYTTMDGTSQNTLTFITSTIEAPNSTSPEVSSSPRLSLSTISQAYPPGFPRKVFAEVIGTFLLVFVGSGSAGLSVIDETRVSKLGASIAGGLIVTVMIYSIGHISGAHMNPAVSLAFSAVRHLPWPQLPFYVAAQLTGAISASYTLRELLEPSHEIGQTSPAGSHIQALIMETVTTYTMVFISMAVATDRNATGQLSGVAVGCSVCIASIVAGPISGGSMNPARTLGPAIAISSYKGLWLYFVGPITGAVLAAWSYNVIRDTEHPGFPFSLSSLSFKIRQSISGTEKVGQRGHQCLV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00867 324 Gene3D Glycerol uptake facilitator protein. 43 292 IPR023271 -
Pste5g00867 324 PANTHER AQUAPORIN NIP2-1 59 291 IPR034294 -
Pste5g00867 324 Pfam Major intrinsic protein 76 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 CDD MIP 78 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 ProSitePatterns MIP family signature. 135 143 IPR022357 -
Pste5g00867 324 SUPERFAMILY Aquaporin-like 72 292 IPR023271 -
Pste5g00867 324 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 PRINTS Major intrinsic protein family signature 117 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 PRINTS Major intrinsic protein family signature 78 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g00867 324 PRINTS Major intrinsic protein family signature 154 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00867 Pste-Chr5 5517928 5522406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00867 78 292 Major Intrinsic Protein MIP AT5G37820 47.005 3.74e-65 206