Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00859 TCTGCCAACTTGAGTCCCCCCAATATCAAACCTTTGGGATCTGCAAACTTCTGCTTACAGCAAAAGATTAAGACCTCTAAATCCAATTTTCTTCAAATGTCAGAAAAACTCTCCTACAATTCATCCTTGAAGGTGCCTTTACTCCCCGGGACAGGGAGGAAGCACAATGATGAGGAGAAAGCCATAGCCTCTCATCATTCTACCAAAAATACTGTATCATTCTTTAGCACCTGCCTTAATGGACTTAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCTTATGCTGTTGCATCTGGAGGGTGGCTAAGCTTGGCTCTTCTGTTTGCTATTGCGGCTGCAGCATTTTATTCTGGCCTTTTGATTAAAAAATGTATGGATAAGAATTCAAACATTAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGGCTAATAATATCAGTCTTCATGTACACCGAGCTTTATTTAGTTTCAATAGGCTTCTTGATTCTAGAAGGAGACAACTTGAGTAACTTATTCCCCATTGGAGAGTTTCAGATAGCTGGCTTAGCAATTGGTGGGAAACAATTCTTTGTGATATTAGTTTCAGTTGTAATCTTGCCCACAGTGTGGTTGGATAACTTGAGTCTACTTTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTCATCATCCTGTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAATTGGAATGGAATCCCAACAGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCGCATCCTGTCTTCCCCACCTTGTACAATTCCATGACAAACAAACATCAGTTCTCTAATGTCCTTATTGTATGCTTTATCTTAACCACTGTGGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTCGGTGCTAAAGTTGAATCACAAATAACATTAAACCTACCACTGAACAAAGTAAGCTCACAATTAGCAATATACACTACATTGGTGAATCCCATAGCCAAGTTTGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGAATTGCTTCCAAGGACATACAAGAATAGAGTGACCTCCATCTTAGTGAGCACTGTGTTAGTAATCAGCACTACCTTTGTTGCCCTTGCAGTTCCTTTCTTTGGGAATCTAATGTCCCTGGTTGGAGCGTTCCTAAGTGTCGCAGCTTCTATTGCTCTTCCATGTATGTGCTACCTGAAGATTTCAGGCACTTATATGAAATTTGGGTGTAACACAGTAGTCATAGTAGCAATAACAGTAGCAGCTATAGTAATGGGAATATCTGGGACCTACACCGCTGTCATCGATATAGTGCCTTTATTACCAGAGAGGGAGGATGATAAGGTGGGTCACGCCATTGATGACTCTCATTCTAATACGGTATCATCCATTCGCACCTGCTTTAATGGACTCAATGCAATATCAGGTGTTGGAATACTCTCAGTTCCATATGCTCTTGCATCCGGGGGTTGGTTAAGCCTGGGTCTTTTGTTTGGCATCGCTGCTGTAGCATTTTACACAGGCACGTTGATTAAAAAATGCATGGATACGAATTCCAATTTAAGAACCTACCCTGACATAGGTGAGCTTGCATTTGGAAAGATAGGAAGACTAATAATATCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAATAGGCTTCTTGATTCTAGAAGGTGATAACTTGAGTAACATTTTCCCTATTGGGGAGCTTCACATAGCTGGCTTAGCAATCAGTGAGAAACAATTATTTGTCATATTGGTTGCCCTTATCATCTTGCCCACTGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCAGCAACTGGAGTGTTTGCTTCTTTTGTCATTATTCTGTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAATTGGAACGGAATCCCTACAGCTGTCAGTTTGTATGCCTTTTGTTACTGTGCACATCCTGTCTTCCCTACCTTGTACAACTCCATGGCAAACAAGCACCACTTCTTTAACGTCCTACTTGTATGTTTTTTTCTTGCCACAGCTGGATATGCATCCATGGCTATAATTGGTTACTTGATGTTTGGTGCCAAGGTGGAATCACAGGTAACATTAAACCTGCCTCTAAACAAAGTAAGTTCACAATTAGCAGTATATATTACCTTGATGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCGATTATCAATGCTTTGAAAGATTTACTTCCAAGAAAGTACAAGAATAGAGGAACCAGCATTCTAATCAGCACTGTTTTGGTAATAAGCACTGTGATTGTTGCCCTAACTATTCCTTTTTTTGGGGATCTAATGTCCCTGGTTGGAGCGTTCTTAAGTGTTACAGCTTCTGTTATGCTACCATGCTTGTGCTACTTGAAAATTTCAGGCATTTATAAGAAATTTGGGTGTGAGGCCGTACTCATAGTGGCAATAATAATAGCAGCCATAGCAATGGGAATATCTGGTACCTACACCTCTCTTAAGGAAATAATCCACCAC 2601 0.4025 SANLSPPNIKPLGSANFCLQQKIKTSKSNFLQMSEKLSYNSSLKVPLLPGTGRKHNDEEKAIASHHSTKNTVSFFSTCLNGLNAISGVGILSVPYAVASGGWLSLALLFAIAAAAFYSGLLIKKCMDKNSNIRTYPDIGELAFGKTGRLIISVFMYTELYLVSIGFLILEGDNLSNLFPIGEFQIAGLAIGGKQFFVILVSVVILPTVWLDNLSLLSYVSASGVFASAVIILSITWTATFDGVGFHQKGTLVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLIVCFILTTVGYASMAIIGYLMFGAKVESQITLNLPLNKVSSQLAIYTTLVNPIAKFALMATPITNALKELLPRTYKNRVTSILVSTVLVISTTFVALAVPFFGNLMSLVGAFLSVAASIALPCMCYLKISGTYMKFGCNTVVIVAITVAAIVMGISGTYTAVIDIVPLLPEREDDKVGHAIDDSHSNTVSSIRTCFNGLNAISGVGILSVPYALASGGWLSLGLLFGIAAVAFYTGTLIKKCMDTNSNLRTYPDIGELAFGKIGRLIISVSMYTELYLVSIGFLILEGDNLSNIFPIGELHIAGLAISEKQLFVILVALIILPTVWLDNLSLLSYVSATGVFASFVIILSITWTATFDGVGFHQKGTLVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMANKHHFFNVLLVCFFLATAGYASMAIIGYLMFGAKVESQVTLNLPLNKVSSQLAVYITLMNPISKFALMATPIINALKDLLPRKYKNRGTSILISTVLVISTVIVALTIPFFGDLMSLVGAFLSVTASVMLPCLCYLKISGIYKKFGCEAVLIVAIIIAAIAMGISGTYTSLKEIIHH 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00859 867 Pfam Transmembrane amino acid transporter protein 71 450 IPR013057 -
Pste5g00859 867 Pfam Transmembrane amino acid transporter protein 480 857 IPR013057 -
Pste5g00859 867 PANTHER OS05G0424000 PROTEIN-RELATED 71 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00859 Pste-Chr5 5442431 5453998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00859 464 865 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.320 1.71e-164 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00859 5 5442431 5453998 Pste5g00859 5 5442431 5453998 ECH