Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00807 ATGACCATGACGATGTCAAGAGTGATGTGTAGACCAACACAGCCACTGAAAAACGTTCCTTCGAGTCCCAGTGGGCAAAGGGAGATGGTGAGGCCAAAAGGAAAAGTAGTGTTGGTGATGGGGGCAACGGGAAGCGGGAAAACGAGGTTGGCGGTGGACTTAGCCACAAGTTTTCCATCAGAAATCATTAACTCAGACAAAATTCAAGTGTACGAAGGGCTTGACGTTGTGACAAACAAAGCCACAAAAGAAGAACAAAGGGGGGTGCCACACCACTTGCTGGGAACACAGAACCCAAACACGGAGTTTACAGCTTCGGACTTTTGCGAGATGGCATCAGACGCCATTGAATGTATAAGGCAGCGAGAGAAGATACCGATAATCGTGGGAGGATCAAACTCGTACATTGAGGCCCTTGTGGAGAGGTTTGGAGGGAGGTACGAATGGTGCTGTCTGTGGGTGGACGTGTCGATGCCTGTGCTTCATTCGTACGTGTCGCAACGCGTTGATGAAATGCTTGGCGGTGGAATGGTGGGAGAGTTGAGACCCTTCTTCAAACCAAACGGGGACTACTCGAGGGGGATTCGAAAGGCCATTGGGGTGCCAGAGTTTGACGCCTATTTTAGGAGGGAAGCGCTTGTGAACAACGAAACCAGGATGAGGTTACTCAACGATGCTGTCAGGGATGTCAAGCGGAATACGTGTCTTTTGGCATGCAAGCAACTTGGCAGGATTCATAAGCTTCGCAGTGTTAAGGGCTGGAACATTCACCGCGTTTCTGCCACTTGCGTCTTTCAGAAACATGGTCAAGAGGCCAATGCTGCCTGGAACACTCTCGTTGCCCACCCTTGTGCCTCCATCGTCTCTCACTTTCTCTCTTCCTCTTCCAATGCTTCTTCTTCTCGGAGACTGCCTTCAACCAATCAACCATAA 933 0.5016 MTMTMSRVMCRPTQPLKNVPSSPSGQREMVRPKGKVVLVMGATGSGKTRLAVDLATSFPSEIINSDKIQVYEGLDVVTNKATKEEQRGVPHHLLGTQNPNTEFTASDFCEMASDAIECIRQREKIPIIVGGSNSYIEALVERFGGRYEWCCLWVDVSMPVLHSYVSQRVDEMLGGGMVGELRPFFKPNGDYSRGIRKAIGVPEFDAYFRREALVNNETRMRLLNDAVRDVKRNTCLLACKQLGRIHKLRSVKGWNIHRVSATCVFQKHGQEANAAWNTLVAHPCASIVSHFLSSSSNASSSRRLPSTNQP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00807 310 Gene3D - 33 292 IPR027417 -
Pste5g00807 310 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 291 IPR039657 -
Pste5g00807 310 Pfam IPP transferase 69 143 - -
Pste5g00807 310 Pfam IPP transferase 146 242 - -
Pste5g00807 310 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 158 256 - -
Pste5g00807 310 MobiDBLite consensus disorder prediction 1 29 - -
Pste5g00807 310 MobiDBLite consensus disorder prediction 1 25 - -
Pste5g00807 310 FunFam Adenylate isopentenyltransferase 5, chloroplastic 158 256 - -
Pste5g00807 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 149 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00807 Pste-Chr5 5147498 5148430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00807 144 298 C2H2 Transcription Factor Family AT2G27760 30.220 1.87e-22 95.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00807 5 5147498 5148430 Pste5g00807 5 5147498 5148430 ECH