Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00792 AATAAATTGTTTGATAGGATTTGAGATACACACCTCTGCATAAAAGTGTTATTTCTTAGAATATCTCTCAAGAGGTAACACTAGCCTCATATGGAAGGATCATCAGGTGTGAGGAAAGGTGCATGGAATCAATTTGAAGATGACCTTCTCAAAGATTGTGTGAACCTTTATGGAGAAGGAAAATGGCACCTTGTTCCTCAAAGAGCAGGGTTGAACAGATGCCGAAAGAGTTGTAGATTGAGATGGTTGAACTATCTAAAGCCAAATATCAAGCGGGGAGATTTCAGTGAAGATGAAGTTGATTTGATGATCAGAATGCATAAGCTTTTGGGAAACAGATGGTCCCTAATTGCAGGGCGACTTCCAGGAAGAACTTCAAATGATGTGAAAAATTATTGGAACACGTACATGCGCCGTAAGGTACAGTCTGACAAGAACGTAAAGAAGCAAGAGGTGGAAGCAAACGTGAAACCCCACCAAGTGATAAAGCCTATTCCTCGAGCATTCTCAAAACCATCCACATGCTTGCAAGAGAAACTCGTTAGTAGTTCCATTGTTGGTGTTAGTGAAGCTGCAGGCGCAAATGCAATTTCATCATCAGAGTCTGAGAATTGGTGGGAAACTTTATTAGAAGACAAGGAGGACAACAACACATGCTTCTTTGGTGGGGAAGATGGAGTAGTTTCGGATCAAAACCTTATTTCAATCACTTGTGACTTTCTTACAGAAGCTGAAACTTGGAGCGATCTTCTTCTTCATATAGGAGATTAGTGTGTCATGTTTGATTTCCCAAGGAACCTCAACTTCTAGTTATTAAGTTCAATCGTATGTATTAGCTTGAGTTAATTTCCTTTAAAATGTTTTTTCTTTACTTTAATTTGTGTCTGTGAACATAT 896 0.3895 MEGSSGVRKGAWNQFEDDLLKDCVNLYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLKPNIKRGDFSEDEVDLMIRMHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYMRRKVQSDKNVKKQEVEANVKPHQVIKPIPRAFSKPSTCLQEKLVSSSIVGVSEAAGANAISSSESENWWETLLEDKEDNNTCFFGGEDGVVSDQNLISITCDFLTEAETWSDLLLHIGD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00792 226 FunFam Myb transcription factor 9 61 - -
Pste5g00792 226 FunFam Transcription factor MYB113 64 135 - -
Pste5g00792 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Pste5g00792 226 SMART sant 61 109 IPR001005 -
Pste5g00792 226 SMART sant 8 58 IPR001005 -
Pste5g00792 226 Gene3D - 9 61 - -
Pste5g00792 226 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Pste5g00792 226 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Pste5g00792 226 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Pste5g00792 226 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Pste5g00792 226 CDD SANT 11 56 IPR001005 -
Pste5g00792 226 CDD SANT 65 107 IPR001005 -
Pste5g00792 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Pste5g00792 226 Gene3D - 63 133 - -
Pste5g00792 226 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Pste5g00792 226 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00792 Pste-Chr5 5062449 5063858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00792 2 145 MYB Transcription Factor Family AT1G66370 59.211 1.55e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste5g00792 Myb_DNA-binding 2.4e-14 CL0123