Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00775 ATGGCAGCTTGCATATTCACGGTGTCACAGGATGGAACCGCGGATTTTCAAACTGTGCAGCAGGCAATCGACGCCGTGCCGCTCGGCAACACTCGCCGGACGGTGATTCGGGTCTCGCCGGGAATCTACCGGCAACCAGTGTACATCCCCAAGACAAAGAATTTCATCACTCTCGCTGCTCTGAGCCCTGAGGACACTGTGCTTACCTGGAACAACACTGCCACCGGAATCGAACACCACCAAGTTCGCACCTTCTCTTCTCTTCGTCTTTTTCCTCAAATGGGTTCAGGGCAAGCAGTTGCAATTAGAGTTACAGCAGATCGATGTGCCTTCTACAATTGCAGGTTCCTGGGATGGCAGGACACACTGTACTTACACTATGGTAAACAATATTTGAAAGATTGTTACATTGAAGGAAATGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCAGCAGGCTTCATAACTGCACAGAGCAGAAAATCATCACAGGAAGCAACTGGTTATGTATTCTTGAGATGTGTCATCACAGGCAATGGAGAAAATTCGTATGCATACCTTGGACGACCATGGGGCCCTTTTGGAAGGGTGGTCTTTGCTTACACTTATATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGTAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTCGGACCTGGTTGCTGCCCATCCAAACGAGTAACCTGGTGCAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCACGCATCCTTTCATTGATCCAGAACCAGGAAAACCTTGGCTTGCTCAAAGGATGGCCCTCAGGATTCCATATTCTGCTTGAAAATTACAGAGGATACTTAATGAGAATGTTCCTAATCTGCCATGTTTAATATGTTTGATGTCTTTTCTATTGGCTTAAGAAAGTATGCCTTGTTTGCATACGTATAAAATGTTTGTGATGAATCCAAAGTTTTAGATTATGGGTTTTCCCGTATGAAATCTCCCAAGAGGTTATATTTCCTTCATTAAAGAATTTTGAGTGTAATAAATAGAATAATAAGATCTTAATGTCCAAAATATAGATGTGAGTTTTTGGTTGTATTGTAGGAATTCATTCCTGAGACTCAAATTTCATTCTCATTCTACGAGTGTGTGGAAACTCAGAATTGA 1214 0.4308 MAACIFTVSQDGTADFQTVQQAIDAVPLGNTRRTVIRVSPGIYRQPVYIPKTKNFITLAALSPEDTVLTWNNTATGIEHHQVRTFSSLRLFPQMGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGNVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQEATGYVFLRCVITGNGENSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPSKRVTWCRELLDEEAEQFLTHPFIDPEPGKPWLAQRMALRIPYSA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00775 294 Gene3D - 4 290 IPR012334 -
Pste5g00775 294 Pfam Pectinesterase 7 274 IPR000070 GO:0030599|GO:0042545
Pste5g00775 294 SUPERFAMILY Pectin lyase-like 3 277 IPR011050 -
Pste5g00775 294 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00775 Pste-Chr5 4960475 4964801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00775 5 287 Carbohydrate Esterase AT5G47500 35.922 7.22e-68 213