Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00762 ATGACAAAACTTTCCCCTCTTGAAGAGGCCCTTTTGAATGGTGACTCTACTGTAAACAACAATTCTGATCCCAGTAATACCAGAGGAAACGAAATTTTAAACTACTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATCAGTCCGCTATTAAGTCTAGGCAACCAGAAGACTTTAGACCATGAGGACCTCCCACTGCTTAATGTTGACGACAGTGTCTATGGGGCCTTTACTACTTTTAGAAACAATCTTGAGTCAGAGTGTGGTAATGTTACGAGAGTGACCACTCTTAAGCTGGTGAAAGTGTTAATCTTGTCAACTTGGAAAGGGACCCTTTTATCCGGTTTGTTAGCATTATTATGCACCTGTGCTTCTTTTGTTGGACCCTATCTTATTGAAAGCCTTGTTCGATACTTAAATCAGGAACACAAGTTTAAAAATGAAGGTTATATGTTGGCTCTGGCATTTGTTGCAGCAAAGCTTGTGGAGTGTTTTTCAGACAGGCACTGGAGATTTAACTTGCAGCAGGTTGGGGTAAAGATGCAATCAATGTTGGTGGCAATGATCTATGCTAAATGTCTCACTCTTTCCTGTCAACCAAAGGAAGGTTACAGCAGTGGGGAAACCATCAACTTAATAACTGTGGATGCCGAAAGGGTTAGTGAACTTTGTTGGTACATGCATTCTCCATGGATATGTATTCTGCAAGTTGTTTTGGCCTTGTTAATTCTCTACAGAAGTGTTGGGATCGCTTCAATAGCTGCTTTTGCTGCCACTGTAATTGTGATGTTGCTAAACCTTCCTGTGGTATCATTCCAAGAAAAGTTCCAACGTAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCGACCTCTGAGATTCTAAAAAATATGAAGATTCTAAAACTTCAAGCATGGGAGATGAAGTTCTTATCAAAGATTTTTCAGATTAGAAAGACAGAGGAAATATGGCTAAAGAAATATCTAGTGAGCACGGCAACTATTATATTTCTCCTGTTTAATACCCCAACTTTTATTGCTGTGGTCACTTTCAGTGTTTGCGTTCTTATAGGCGTTCCACTTGAATCAGGGAAAATCTTATCTGCACTTACAATATTTGAAACTCTTCAAATGCCCATCATCAATCTTCCTGATACAATTTCAGTAATTGCACAAACTAAGGTTTCGCTTGATAGGATTGCATCATTTCTTTGTCTAAATGAGTTGGAGACTGATGTAGTGGAGAAACTTCCTCGGGGTAGTTGTGATATGGCTATTGAATTAGTAAATGGAAATTTCTCTTGGGATTTATCTTCCCTAAACACAACATTAAGAAACATAAATCTCACAGTTTTTCATGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGAAAATCTAGTTTACTTTCTTGTATAATAGGTGAAATCCCTAAGATATCAGGGACCCTGAAGGTGTGTGGATCAAAGGCTTATGTGTCTCAATCACCATGGATACAAAGTGGCAAGATAGAAGAGAACATATTATTTGGCAAAGAAATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGGCAAAAGACCTAGAGGTTCTACCATTTGGTGATCAAACAATTATTGGAGAGAAGGGAATTAATTTAAGTGGCGGACAGAAGCAGAGATTACAAATAGCCCGTGCTCTTTACCAAGATGCTGACATTTATTTATTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCCCATCTCTTTAGGGAATGTCTGCTTGGCCTTCTGAAAACAAAAACTGTGATATACATAACTCATCAAGTGGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGAAGGAAGAATAACTCAATCAGGAAAATATAATGACATGCTCAAGTCAGACACTGACTTTATGGAACTTGTAGGTGCACATAGAGAAGCATTGTCAATGCTTGATACAGTGAATATCTGCACAAAGGACACAGATTCACAAAGTGATTTGGAACTTCAGCAAAAAGAGAAAAAGGTAGATGATCATCGTGATAAGTCAGATGGCACAGTTAAGCCAAAAGGACAACTTGTTCAAGAAGAAGAACGGGAAAAGGGTAAAGTTGGGTTTAAGGTCTACTGGAAATACATCACAACAACTTATGGAGGAGCTTTTGTTCCCTTTATATTGCTCGCACAGACACTCACCATGCTTTTTGAGATTGCAAGCAACTATTGGATGACCTTAGCAGCTCCTGTTTCTGCAACTGCCGAAACTGGTATTGAAAGCTTTACTCTTATGGTTGTCTATGTTGCTTTGGCGATTGGAAGTTCCTTTTCCTACCTTATCATATCAGTTCTTAGTGCAATAGCCGGATACAAAACAGCCACTATGCTCTTTAATAAAATGCATTTGTGTGTTTTCCGAGCACCAATGTCATTTTTTGATGCCACACCAAGTGGGAGAATCCTTAATAGAGCTTCAACAGACCAAAACACAATAGACATAAGCATTTCGGAATTGGTCTGGGACATTACCTTCGATCTGATTCAGCTCTTGGGAATTATTGCGATGATGTCTCAAGTTGCATGGCAGGTGTTTATAGTATTGATTCCTATCATGATAGCTTGCATATGGTACCAGCAATACTATTCAGGATCGGCACGTGAATTGGCACGATTAGTTGGTATATGCCAAGCTCCTGTTATACAACATTTTTCTGAAACAATTTCAGGATCAACAACCATACGATGTTTCGAGCTACAATTGAGATTTAATGACACACATATGAAACTGGTTGATAGATATTCTCAACCTAGATTGTACAGTGCCAGTGCAATGGCATGGCTGAACTTCAGATTGGATATTTTATCCATCATCACATTTGCCTTCTGTTTGATTTTCTTGATATCTTTTCCAAATTCAAGTACTTCTGCTGGCATTGCGGGATTGGCTGTGACATATGGGCTTAGTCTAAACGATGTACAATGTAGTTTAATCAGCTCTCTTTGCAATTTGGAAAGTGAAATTATATCCGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAAGCTCCTCTTATAATGAAAGACAATCAACCAGATCATTCTTGGCCATCAATTGGAGAGATTCATATCCAGGATTTACAGGTTCGATATGCTCCTCATTTGCCTCTTGTTCTACATGGTCTTACTTGCACTTTTACTGCTGGAGAAAAAACTGGCCTTGTGGGAAGAACAGGAAGTGGCAAAACAACTCTAGTGCAAACACTTTTTCGACTTCTAGAACCTGTTGCTGGACAAATATTGATAGATGGTACAAACATCTTTTTTATTGGAATTCATGATTTGAGGTCCAGACTGAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTTCGAAACAACTTGGATCCCTTGGAAGAATATACAGATGAGCAGATTTGGCATGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAGAAAGAAGGGAAGCTTGACTCCACAGGCTTGACTTCTCAAAACTTTGAACATAGATGCTATAGGATTATGGGTCAAAGGCAATTGGTCTGCCTCGGCCGTGTACTACTAAAGAAAAGCAAGATATTGGTGCTTGATGAAGCTACTGCCTCAGTTGATACATCCACAGATAATATTATTCAGCAAACAGTGAAACAACATTTTTCAGAAAGCACAGTCATTACCATTGCTCATAGGATAACTTCAATCCTAGATAGTGACATGGTTCTGTGTCTTAATCAAGGGCTTATTGAGGAATATGATTCACCCAAGAAACTGCTTATGAACAAATCTTCATCTCTTGCTCTACTAGTTGCAGAATACACAAGAAGATCAAACTCTAGATTTGAAAGTTAAATTGGAACCACACGTGTCATTCACATATATTTA 3939 0.3882 MTKLSPLEEALLNGDSTVNNNSDPSNTRGNEILNYYSNAGFFSILTFSWISPLLSLGNQKTLDHEDLPLLNVDDSVYGAFTTFRNNLESECGNVTRVTTLKLVKVLILSTWKGTLLSGLLALLCTCASFVGPYLIESLVRYLNQEHKFKNEGYMLALAFVAAKLVECFSDRHWRFNLQQVGVKMQSMLVAMIYAKCLTLSCQPKEGYSSGETINLITVDAERVSELCWYMHSPWICILQVVLALLILYRSVGIASIAAFAATVIVMLLNLPVVSFQEKFQRKIMEFKDKRMKATSEILKNMKILKLQAWEMKFLSKIFQIRKTEEIWLKKYLVSTATIIFLLFNTPTFIAVVTFSVCVLIGVPLESGKILSALTIFETLQMPIINLPDTISVIAQTKVSLDRIASFLCLNELETDVVEKLPRGSCDMAIELVNGNFSWDLSSLNTTLRNINLTVFHGMRVAVCGTVGSGKSSLLSCIIGEIPKISGTLKVCGSKAYVSQSPWIQSGKIEENILFGKEMDREKYEKVLEACSLAKDLEVLPFGDQTIIGEKGINLSGGQKQRLQIARALYQDADIYLFDDPFSAVDAHTGSHLFRECLLGLLKTKTVIYITHQVEFLPDADLILVMREGRITQSGKYNDMLKSDTDFMELVGAHREALSMLDTVNICTKDTDSQSDLELQQKEKKVDDHRDKSDGTVKPKGQLVQEEEREKGKVGFKVYWKYITTTYGGAFVPFILLAQTLTMLFEIASNYWMTLAAPVSATAETGIESFTLMVVYVALAIGSSFSYLIISVLSAIAGYKTATMLFNKMHLCVFRAPMSFFDATPSGRILNRASTDQNTIDISISELVWDITFDLIQLLGIIAMMSQVAWQVFIVLIPIMIACIWYQQYYSGSARELARLVGICQAPVIQHFSETISGSTTIRCFELQLRFNDTHMKLVDRYSQPRLYSASAMAWLNFRLDILSIITFAFCLIFLISFPNSSTSAGIAGLAVTYGLSLNDVQCSLISSLCNLESEIISVERILQYTSIPSEAPLIMKDNQPDHSWPSIGEIHIQDLQVRYAPHLPLVLHGLTCTFTAGEKTGLVGRTGSGKTTLVQTLFRLLEPVAGQILIDGTNIFFIGIHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWHALDMCQLGDEVRKKEGKLDSTGLTSQNFEHRCYRIMGQRQLVCLGRVLLKKSKILVLDEATASVDTSTDNIIQQTVKQHFSESTVITIAHRITSILDSDMVLCLNQGLIEEYDSPKKLLMNKSSSLALLVAEYTRRSNSRFES 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00762 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1050 1289 IPR003439 GO:0005524
Pste5g00762 1301 CDD ABCC_MRP_domain1 429 629 - -
Pste5g00762 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 733 1013 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00762 1301 CDD ABC_6TM_ABCC_D2 731 1025 IPR044726 GO:0140359
Pste5g00762 1301 SUPERFAMILY ABC transporter transmembrane region 109 411 IPR036640 GO:0005524|GO:0016020
Pste5g00762 1301 Gene3D - 1033 1289 IPR027417 -
Pste5g00762 1301 FunFam ABC transporter C family member 10 98 411 - -
Pste5g00762 1301 FunFam ABC transporter C family member 5 695 1031 - -
Pste5g00762 1301 Pfam ABC transporter 447 581 IPR003439 GO:0005524
Pste5g00762 1301 ProSitePatterns ABC transporters family signature. 554 568 IPR017871 GO:0005524|GO:0016887
Pste5g00762 1301 CDD ABC_6TM_ABCC_D1 125 403 IPR044746 GO:0140359
Pste5g00762 1301 FunFam ABC transporter C family member 5 414 661 - -
Pste5g00762 1301 MobiDBLite consensus disorder prediction 681 705 - -
Pste5g00762 1301 Gene3D - 411 667 IPR027417 -
Pste5g00762 1301 SUPERFAMILY ABC transporter transmembrane region 731 1032 IPR036640 GO:0005524|GO:0016020
Pste5g00762 1301 Pfam ABC transporter transmembrane region 115 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00762 1301 Pfam ABC transporter transmembrane region 734 977 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00762 1301 CDD ABCC_MRP_domain2 1048 1273 - -
Pste5g00762 1301 SMART AAA_5 1076 1266 IPR003593 GO:0016887
Pste5g00762 1301 SMART AAA_5 456 629 IPR003593 GO:0016887
Pste5g00762 1301 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 115 395 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00762 1301 Pfam ABC transporter 1067 1220 IPR003439 GO:0005524
Pste5g00762 1301 Gene3D ABC transporter type 1, transmembrane domain 87 410 IPR036640 GO:0005524|GO:0016020
Pste5g00762 1301 Gene3D ABC transporter type 1, transmembrane domain 694 1031 IPR036640 GO:0005524|GO:0016020
Pste5g00762 1301 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1288 - -
Pste5g00762 1301 FunFam Multidrug resistance-associated protein member 4 1034 1291 - -
Pste5g00762 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1041 1280 IPR027417 -
Pste5g00762 1301 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 429 652 IPR003439 GO:0005524
Pste5g00762 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 651 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00762 Pste-Chr5 4859135 4866070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00762 429 658 Calmodulin-binding Proteins AT2G36910 30.400 5.02e-24 108