Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00738 ACAGAAAACGGCAAAGGGTTGAACGTAATAGAAAGGAGTGAGGAGTGAGGAGTGAGGAGTGAGGTTCCGTTCTCCAATTGCATTTTGTTATATATGAGATGTCCTTGCCCCCTGAGAGGTGAGAGGTGAGAGGTGAGAGGTGAGAGGTGATGTTACATGGTATGGTAATTGATGATGTGGAAGAGCATCTCGTGGATGGGTAAAAAGGTGGGAGGAAGGAAGTCAATTAGCAATGGAGATAGTGGGAGCGGGAGCGAAGGTGTGGATGAAAATCCATTTGGGAGCGGAATGGAGTGTTACGCGTGCACAAAGGTAGGGGTGCCGGTGTTTCACTCAACCAGCTGCGACAGCTTCCATGCGCCGCAGTGGGAGGCATCGGCAGGCTCCTCTCTGGTTCCAATCCACAACCGTCCCTCAACGAACAAGACATGTGCCCTATCGGCATCAACTAAGGGTCCCTTGGGTCGGGTTCTGGATCCGAGGAGCAAGCGCGTACAGAGGTGGAACCGCGCCCTCCTCCTCGCTCGTGGGGTCGCCCTCGCTATAGACCCCCTCTTCTTCTACGCCCTCTCCATCGGAAGGGAGGGCTCCCCCTGTCTCTACATGGATGGTGCTCTTGCAGCCATGGTCACCGTCGCCCGCACCTCCCTCGACGCCCTCCACCTCCTCCACCTTTGGCTCCAATTCAGACTCGCCTACGTCTCCCGCGACTCCCTCGTCGTCGGCTGTGGCAAACTCGTCTGGGACGCTCCTCAGATCGCCTCCCATTACCTCCGATCCTTCAAGGGCTTCTGGTTCGACGCCTTCGTCATCCTCCCAGTTCCCCAGGCTGTGTTTTGGTTAATAGTGCCAAAATTACTAAGAGAAGAGAAAATTAAAATCATTATGACCATAATGCTTTTGATTTTTCTGTTCCAATTTCTCCCTAAGGTCTATCACAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGAACCATTTGGTGGGGCTTTGCTCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCTATTCAACGTGTTGCGTCATGCCTCCGGCAGCAATGTGAGAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTCTGTTACCAACAGGCGAGATAGGAAATTCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTCTGTGCTTAGATGTTGATGGGCCTTTCCAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCTATTTTTTGGGGTTTGATGACCCTTAGCATAATCCCTACCAACTGTTGCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTTAGTATATGCATCGTACTTAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATCCAGGTATTCTTACATGCGGTCATGGCTAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAAGAGGAGGCAGTTGCCATCGCGATTACGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCTGCGATGGGAGGAGAAGATGAAATGGAAATGATCAAAGACTTGCCTGAGGGGTTGAGGAGGGACATCAAGCGCCACCTTTGCCTCGATCTCATTAGAAAGGTTCCTTTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGCGGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCATCGTCCGAGGACGCATAAAACGCACCCAAAGTCTGAGCAAAGGCATGGTAGCCTCAAGCATCCTTGAACCAGGGGGGTTTTTAGGTGATGAGCTACTTTCATGGTGCCTTCGGCGGCCATTTATCGACAGACTTCCAGCCTCCTCAGCCACATTTGTGTGTCTTGAATCAGCAGAAGCCTTTGGCCTTGATGCTGATCACTTGAGGTACATCACTGATCACTTCCGATACAAATTTGCCAACGAGAGACTGAAGAGAACTGCAAGATATTACTCGTCCAATTGGAGAACCTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACAATGGAGGAGGAACTGAGCGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATGAAAGCTTTCTAATTTTTGTTGCTTCCATATCCCCAATAAAACTGTCTCAAGCTCATTGGAGCTTTTGAAGTTGTTGTAAAGTCATGGAATCATTCGTGAATTGTATAAAAGAAACGCAAAATCATTGGGGTCTCGTTCGTTCAACTTATTGTAAGCTTACTATAATGAATTTTTCATGGGATTTGTATCTTGAGCAATATCCCTTGCCGAGGCTGCTATGTGCTTCTGTTATTTGATATTTAGATCATATCATTTTGTAATTTAAATACAATGATTGCATAAATGTTTTTGACTTGTGCAATTCATATAACAATTCTACCATTTTTGTATAATAACTTTCGGTGGCA 2653 0.4678 MMWKSISWMGKKVGGRKSISNGDSGSGSEGVDENPFGSGMECYACTKVGVPVFHSTSCDSFHAPQWEASAGSSLVPIHNRPSTNKTCALSASTKGPLGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGALAAMVTVARTSLDALHLLHLWLQFRLAYVSRDSLVVGCGKLVWDAPQIASHYLRSFKGFWFDAFVILPVPQAVFWLIVPKLLREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPTGEIGNSCGGNSTVVRKPLCLDVDGPFQYGIYQWALPVISSNSLAVKILYPIFWGLMTLSIIPTNCCSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVRPLVFSKDEKIIREGDPVPRMVFIVRGRIKRTQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDADHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDNGGGTERRLLQYAAMFMSIRPHDHLE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00738 711 Gene3D Jelly Rolls 521 639 IPR014710 -
Pste5g00738 711 MobiDBLite consensus disorder prediction 1 31 - -
Pste5g00738 711 Gene3D Helix hairpin bin 449 514 - -
Pste5g00738 711 Pfam Ion transport protein 111 441 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste5g00738 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 94 676 - -
Pste5g00738 711 SMART cnmp_10 523 649 IPR000595 -
Pste5g00738 711 SUPERFAMILY cAMP-binding domain-like 450 637 IPR018490 -
Pste5g00738 711 CDD CAP_ED 523 633 IPR000595 -
Pste5g00738 711 SUPERFAMILY Voltage-gated potassium channels 102 444 - -
Pste5g00738 711 ProSiteProfiles cAMP/cGMP binding motif profile. 523 633 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00738 Pste-Chr5 4783574 4790068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00738 33 711 Ion Channels AT5G15410 77.649 0.0 1047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00738 5 4783574 4790068 Pste5g00738 5 4783574 4790068 ECH