Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00734 ATGTCCCTACCCTGTTATTTCTACCTCTTTCCCATAGTGTATCTGTGCTTGACTTTGCCAGCTTCATCTGAGGGGGGGAACGAGACCGTATCATGTCCCCTGAACATAACGGTGCTACGAGTGTTGGGGGGAGGGCGGCGGCCCTCCTTCGACGCCGGCACGCAGTGCCATTACATCCTGCAAGCCCTCCACCTGCTCCAGGCCGACTACCTCCACCGGGAGAACAGGTTCGTGCCGCCCCTAAACGCCTCGGAATCATGCTGGCAGATGTTCCAATCATTCATCAACGAGTTCGACGCTACCATCGATGTCCGCTCCTCCTGCGGCTTCCGAACAGAGTGGATCTCCTACGGCTGCATGAACATGACCACAAGACAAGAATTCGAACGCACCGTTCCCCGCGACCCCATCCAAGGCGTCCAAACCAACTGCAATCAGTCCCTCCAAAACAACGCCCCCTGCGCCCTCTGCACCACCAAAATCTCCACCATGCTCTCCTTCTTAACCGGAACTACCCTCGGCAACGTCTCCGATTGCCGAGCCTATGCCTCCATCTACGCCGCTTCTCTCTCCGACCGCTACGGTGCCTCTGATCCCGGCACCGCCGCCTGCCTCTTCGGCCTCAATTTCTCCTCCTCCTCCTCCTCTTCTAAGCGCCGAACCCTCGTTATTGCGCTGGTTTCTGTTTTCGCTTTGTTGGCTTTGCTCCTTTTTTCTGCCCTTTGGGCTTACTTGAGATTCAAGAAGAGGAAGGAGCTTTCCGCTGCCGGAACAACTGATATAGGTTTGGATTCCATGAACCAGAGTACCACTTTGATAAGGTTCGCTTTTGATGACGTTAAAAAGGCCACCCGGAACTTCCACAGGGATAACATAATCGGAAGTGGTGGTTATGGCAATGTTTATAAGGGGATGTTGTTAGATGGTAGCCCAGTCGCGTTTAAAAGGTTCAAGAATTGTTCTGTTGCCGGGGATGCTAGCTTCACTCATGAGGTTGAGGTTATTGCCAGTGTTCGCCATGTCAATCTTGTTACTTTGAGAGGTTACTGTACTGCCACAACCAATTTAGAGGGTCATCAGAGGATTATTGTCACTGATTTGATGGAAAATGGGAGTCTTTATGACCATTTATTTGGTTCTGCTAAGAAGAATCTCAGTTGGCCAATTCGTCAAAAGATTGCTTTAGGGACCGCTAGAGGGTTGGCCTATTTGCATTATGGGGCGCAACCTTCCATCATTCATCGGGATATTAAAGCTAGTAACATACTTCTGGACCACAAGTTTGAAGCCAAGGTTGCAGATTTCGGATTAGCCAAGTTCAACCCCGAGGGAATGACTCACATGAGTACTAGAGTGGCTGGAACTATGGGTTATGTTGCTCCTGAGTATGCCTTGTATGGACAATTGACAGAGAGAAGTGACGTCTTCAGTTTTGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCTCTTCAAACGAACGATGATGGCCAACCCTCTGCACTAACCGATTTTGCTTGGTCGTTAGTTAGAAATGGTAGTGCTTTGGATGTTGTTCAAGATGGAATTCCAGAACCTGGTCCACCACAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTATTGTGTTCTCATCCACAGCTGTATGCTAGGCCAACAATGGATCAGGTTGTCAAAATGCTGGAGACCGATGAATCGGTGCCCTCGCCCTCGCTGATGGAAAGGCCAATTCCTTTTATTTCTGGGAGGATTGATATTGAGAAATCCGCGCTGAGTAATTCGGGTCAGCTATGCAGTCCAACTGGTTATCAAGCATATACATTACAAGCTCGACGTAAATCCAATTCTAAGGAAGAAGAACAAGAAGGAAGTTCTGTGGCTGAGACTGTCACCACAGATTGA 1902 0.4926 MSLPCYFYLFPIVYLCLTLPASSEGGNETVSCPLNITVLRVLGGGRRPSFDAGTQCHYILQALHLLQADYLHRENRFVPPLNASESCWQMFQSFINEFDATIDVRSSCGFRTEWISYGCMNMTTRQEFERTVPRDPIQGVQTNCNQSLQNNAPCALCTTKISTMLSFLTGTTLGNVSDCRAYASIYAASLSDRYGASDPGTAACLFGLNFSSSSSSSKRRTLVIALVSVFALLALLLFSALWAYLRFKKRKELSAAGTTDIGLDSMNQSTTLIRFAFDDVKKATRNFHRDNIIGSGGYGNVYKGMLLDGSPVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQTNDDGQPSALTDFAWSLVRNGSALDVVQDGIPEPGPPQVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSPSLMERPIPFISGRIDIEKSALSNSGQLCSPTGYQAYTLQARRKSNSKEEEQEGSSVAETVTTD 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00734 633 SMART serkin_6 287 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00734 633 Gene3D Transferase(Phosphotransferase) domain 1 368 569 - -
Pste5g00734 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 630 - -
Pste5g00734 633 CDD STKc_IRAK 293 562 - -
Pste5g00734 633 Pfam SPARK 29 176 IPR043891 -
Pste5g00734 633 SUPERFAMILY Protein kinase-like (PK-like) 269 585 IPR011009 -
Pste5g00734 633 Gene3D Phosphorylase Kinase; domain 1 251 366 - -
Pste5g00734 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 248 366 - -
Pste5g00734 633 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 368 569 - -
Pste5g00734 633 MobiDBLite consensus disorder prediction 609 633 - -
Pste5g00734 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pste5g00734 633 ProSiteProfiles Protein kinase domain profile. 287 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00734 633 Pfam Protein kinase domain 287 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00734 633 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00734 Pste-Chr5 4753028 4754929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00734 31 608 Receptor kinase-like Gene Family AT2G48010 60.544 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pste5g00734 Pkinase 2.4e-42 CL0016