Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00700 ATGGCAGAGCCAACAGCCATCTACGAGTTCCTTAAGCAACCCTCAAACGGCGGTGGTGCAAAGAGAGCTGCTGCTGCGGCGGCGCCACCACCTTCCGCCGCGACACGCACCTTCCAATGCCACTTCTGCCACCGCAAATTCTACACTTCGCAAGCCCTGGGCGGCCACCAGAACGCCCACAAGCTGGAGCGAGCCGCCGCGAGAAGATCAACCAACATGAGCAGCAGCCAGCTCCCGCTCCCCCTCAAGCCCAGCGAGCCCACCAAGCCCAGGCCCATGCTGGAGCCCGCTTCCTCCCCCACCGGGCTTTTCTTCCACCACCACCACCCTCCCTACTGGCTCGACGTTGAGCCTCTTCAGTTCCCACCCACCACCCACCACCACCACCACCTCGCCGCCACCCTCCCTGTTCCTTCCGCAGCGCCCCTCCGCCTCCGCACCCCACAATGTCGACGCCTCCGACCACCTCAACCTCGACCTCACTCTCCGCTTGTGAACAACAACACAGCCGCTAGCTCCTTCTCTTACGTTAATGTCGTTAGTTTTTAA 549 0.623 MAEPTAIYEFLKQPSNGGGAKRAAAAAAPPPSAATRTFQCHFCHRKFYTSQALGGHQNAHKLERAAARRSTNMSSSQLPLPLKPSEPTKPRPMLEPASSPTGLFFHHHHPPYWLDVEPLQFPPTTHHHHHLAATLPVPSAAPLRLRTPQCRRLRPPQPRPHSPLVNNNTAASSFSYVNVVSF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00700 182 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Pste5g00700 182 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Pste5g00700 182 Gene3D Classic Zinc Finger 20 84 - -
Pste5g00700 182 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Pste5g00700 182 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 84 IPR044246 GO:0009788
Pste5g00700 182 MobiDBLite consensus disorder prediction 64 96 - -
Pste5g00700 182 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00700 Pste-Chr5 4553335 4553883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00700 31 74 C2H2 Transcription Factor Family AT1G66140 61.364 3.06e-14 67.0