Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00675 ATCACACTGCATGTCTTGTTTGTACATCTATAAATTGAATTCCTTACATCATACCTTGCAAGTGTGATTCACTCAAAGAGTTGAGACAGGTTCCTTCTTCTCCCAAGGCAAGGTCCTTGGGCCACACTCTTTGAGATGGAAGTCTTGAACCCAATTGAGGGCAAGAACTACAAGCTCCCTGTTGGCTACAGATTTGACCCCACTGATGATGTTCTTGCTGGCTATTACCTCTGGAAGAAGATTTTGGGCCAGCCAATTCCAAATGATCTCATTCAAGACTGTGATGTTTACCAAACTGTGCCTTGGGAGCTACCTGGAGGAGGGCAGCACTTGAATTGGCACAGGTTTTTCTTCTATGATGTCAGGGCCAATGTGTTTGAAAACCCTGATGAGAGAAATGCTGGCAATGGACAATGGAGAACATTGGAAAAAGGACAACATGTTGAGCTGTCTAACAACCTGCAGGTAGCTGGCAAGAAGAACATTTTGGTTTTCTGGAAACCCAGGGGAAACCGTTTGGTTAAGACAAACTGGTTCATGCATGAATTCCGCCTTAGTTTTAAACCTCAACCATCTAAGATGTCTTTTCTGACTGTGTGCCGCATATTTGAGGAGGGAAGAAGGACCAAAAGGGCAAAATCGTCCAACGTGGAAGCCGTAACTGGCATTGAACAAGACATAGAAGGCACCCCCATTGTCATTGATTTCAAAATGGAGCCTGGCACTGTGACTCAACCTCCTTCTCCTGGGACCCCATGAGGCATTCAAATTGCCTCATTAGCTAGATTAGAAGTTGCTCAAAACCTTTAATATTGTAAAATATCAATCAATTGTGAACCCCCATAGGCACCAAACTACTATTTATCTTATCTCTTAATCTGCTTAATCTGTGTATATAGGAGTTTGTTTAGTGTATGGGCTCATAATTTTACTAATAAGAGACAACTGTTT 951 0.4248 MEVLNPIEGKNYKLPVGYRFDPTDDVLAGYYLWKKILGQPIPNDLIQDCDVYQTVPWELPGGGQHLNWHRFFFYDVRANVFENPDERNAGNGQWRTLEKGQHVELSNNLQVAGKKNILVFWKPRGNRLVKTNWFMHEFRLSFKPQPSKMSFLTVCRIFEEGRRTKRAKSSNVEAVTGIEQDIEGTPIVIDFKMEPGTVTQPPSPGTP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00675 207 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Pste5g00675 207 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Pste5g00675 207 PANTHER NAC TRANSCRIPTION FACTOR 56 14 167 - -
Pste5g00675 207 Gene3D NAC domain 23 166 IPR036093 GO:0003677|GO:0006355
Pste5g00675 207 SUPERFAMILY NAC domain 11 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00675 Pste-Chr5 4403327 4405051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00675 14 166 NAC Transcription Factor Family AT2G24430 35.032 8.10e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste5g00675 NAM 4.7e-21 No_clan