Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00672 CATCAAGTGATGGGGCAAAGACAGATCTTTGCTGGTGTGATGATTTTGTTGCTTATGGTCCTAGTTAGTGTTGAAGGAGGGGAAGCATCTGATAGGATTTTGGAACTCCCTGGCCAGCCCAAGGTCTCCTTTCACCACTTCTCTGGCTATGTTACTGTCAACAAGCTTGCTGGTAGAGCTCTCTTTTACTGGCTCACTGAAGCTTCTCAAAATCCTCTCACCAAACCTTTGGTCATTTGGCTCAATGGAGGATGTTCATCAGTGGCATATGGAGCATCTGAAGAAATCGGACCATTTAGGATAAATAAAACAGCTTCTGGGCTATACATTAATAAGTTCTCATGGAACACAGTGGCCAACCTCTTGTTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTACACCAACCGCTCTTCCGACCTCCTCGACACCGGTGACCGCCGCACCGCCCAAGACTCTCTTGAATTTGTTATCCAATGGCTAGAACGATTCCCGCGTTACAAAAACAGGGAACTTTATATCACTGGAGAGAGCTATGCTGGCCATTATGTTCCTCAATTAGCTAAGGAAATCATGAACTACAACGCAAAAACCAAGCATGCCATCAATCTCAAAGGAATAATGGTAGGAAATGCAGTGACAGACAACTACTATGATAACTTGGGCACAGTGACGTATTGGTGGAGCCATGCTATGATCTCCGACCAGACTTACCGGCAACTCATGAGTACATGTGATTTTCACCGGCAGAAGGAATCTGATGAGTGTGAATCTGTGTATAGCTATGCCATGGATCAAGAATTTGGTAACATTGATCAGTACAACATCTATGCTCCTCCATGCAACAACTCTGATGGTAGTAGCTCTGCCACCCGTCACACCATGCGAATTCCTCATCGACCCCATACGAATTTTAGGCAATGGTCTGGTTATGACCCATGTACGGAGAAGTATGCAGAGATTTACTACAATAGGCCTGATGTTCAGAAAGCACTTCATGCCAACACAACCGGCATTCCTTACAGGTGGACTGCTTGCAGTGAGGTTCTGAATCGTAACTGGAATGATACGGATGTATCTGTTCTCCCAATTTATAGAGATGGGGACGTGGACTCAGTGGTACCAGTCACAGCAACCAGATATGCCCTTGCGCAGCTTAAGTTGTCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACAGAGGTGTATGAAGGGGTAACATTCGCGACGGTGAGAGGAGCAGGGCATGAAGTGCCGTTATTCAAGCCAAGAGCAGCCCTTCAGTTATTCACATCATTCCTTACAGGAAATCCTCTTCCAAAGTCCTAAAAAACCAAAAACAAGATGGTGTTAAGAAAAAAAAAATGACAGGTAAAAAGGAGAAACAAGTGTAAAAGGTCAGAGTCAGAGATGCTAATTTCTATTGCCTTGTAATCTTTGATCTGAACAAAGTTTATGACATTTTTCGTTCCCAGCAAATTAACAGGGGGGGTTGATGGTGGATAGGG 1529 0.4493 HQVMGQRQIFAGVMILLLMVLVSVEGGEASDRILELPGQPKVSFHHFSGYVTVNKLAGRALFYWLTEASQNPLTKPLVIWLNGGCSSVAYGASEEIGPFRINKTASGLYINKFSWNTVANLLFLEAPAGVGFSYTNRSSDLLDTGDRRTAQDSLEFVIQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMNYNAKTKHAINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESVYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSATRHTMRIPHRPHTNFRQWSGYDPCTEKYAEIYYNRPDVQKALHANTTGIPYRWTACSEVLNRNWNDTDVSVLPIYRDGDVDSVVPVTATRYALAQLKLSTKIPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFTSFLTGNPLPKS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00672 449 Gene3D - 314 350 - -
Pste5g00672 449 Gene3D - 351 443 - -
Pste5g00672 449 SUPERFAMILY alpha/beta-Hydrolases 29 447 IPR029058 -
Pste5g00672 449 Pfam Serine carboxypeptidase 38 442 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 Gene3D alpha/beta hydrolase 28 283 IPR029058 -
Pste5g00672 449 ProSitePatterns Serine carboxypeptidases, histidine active site. 413 430 IPR033124 GO:0004185
Pste5g00672 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 430 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pste5g00672 449 FunFam Carboxypeptidase 355 443 - -
Pste5g00672 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pste5g00672 449 FunFam Carboxypeptidase 27 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00672 Pste-Chr5 4367886 4374311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00672 319 446 Calmodulin-binding Proteins AT2G22960 28.369 3.50e-11 60.5