Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00655 ATGGACAAAGAGACCCACGACTTCATCAACGTCGATTCTTTCTCTCAGCTTCCCTTTCTCCGCCCCGCACCACCCTCTAAAGAAAAACCCATTCGCCTTTTCGGCCATGATTTTTGTGATAAACCTCATACTACCCACAATGTTAGCGCTTCCCATGGCAACACCAACACCGAAAACGCCGAGCCTAGTCGCAGGTTTGAGTGTCATTACTGTTGCAGAAGCTTCCCCACTTCCCAGGCCTTAGGCGGCCATCAAAACGCGCACAAGCGAGAGCGCCAGCACGCTAAACGACACCTTCAAGGTAACCTTCCGGATCCCAACCGCTACGCCTACATCAACTACAACTTCGCTTCAACGCCGTCTTTCTCTTATAATTCTTCTTATCCACCGTCCAATGGTAGCTCGCGTAGCGCTATGGTTGTTGGGAACACTGGTGGAGGCGGAAGGTTCTACGGAAATTCAAACTCTTTTTCTTCTCATCGTCAATTTCAACCCATCAATGGAAGCCCCTTGGGTTCCTGGGCAATCCCCTCTCATGCTGACCAGACTAACCCTATTTTCAACCGCCAACGTTTGTTGCCTTTGTTTTCTGGCCGTCAGGAAATGGTCAACATGTTGGGCCCCTCCGGTTCTCAAACCCGGTTTAGTTATGACCCCAAACCCACCGTGAACGACCATGTGAGTTTGGATCTTCATCTCTAG 702 0.5028 MDKETHDFINVDSFSQLPFLRPAPPSKEKPIRLFGHDFCDKPHTTHNVSASHGNTNTENAEPSRRFECHYCCRSFPTSQALGGHQNAHKRERQHAKRHLQGNLPDPNRYAYINYNFASTPSFSYNSSYPPSNGSSRSAMVVGNTGGGGRFYGNSNSFSSHRQFQPINGSPLGSWAIPSHADQTNPIFNRQRLLPLFSGRQEMVNMLGPSGSQTRFSYDPKPTVNDHVSLDLHL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00655 233 SUPERFAMILY beta-beta-alpha zinc fingers 63 94 IPR036236 -
Pste5g00655 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Pste5g00655 233 MobiDBLite consensus disorder prediction 81 104 - -
Pste5g00655 233 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Pste5g00655 233 PANTHER ZINC FINGER PROTEIN GIS 1 233 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pste5g00655 233 Pfam C2H2-type zinc finger 65 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00655 Pste-Chr5 4246782 4247483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00655 2 233 C2H2 Transcription Factor Family AT3G58070 38.806 2.36e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste5g00655 zf-C2H2_6 4.3e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00655 5 4246782 4247483 Pste5g00655 5 4246782 4247483 ECH
Pste5g00655 5 4246782 4247483 Pste4g02846 4 19972767 19973627 PCT