Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00649 ATGATACCGTGGAACAGAATTTTGACAATCACAAAGACGAAGGACAAAACTCTGCAGGTAGCAACCAACAATGAGAGACATAAGATGGTGATTAAGAGCCCAAAAGAAGCAGATTTTCCATTAAAACAGGAGGCCCATTCTCAATCAATTATTGATCCTGAAAAGGCAAAAGTTTCATCAAGCTCGGCAGCACAATTGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCTAGAGCCTTTGGAGGAAAAGATAGGCATAGTAAGGTTTGCACAATAAGAGGGTTAAGAGACAGGCGGGTGAGACTATCAGTTCCAACTGCCATCCAACTGTATGATCTTCAAGATAGACTAGGGCTCAATCAGCCAAGCAAGGTTGTTGATTGGTTGCTAAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTGCCTATTGTTCCTTCGGTGAATAACTTCACCCTTGGTTATCCATTTGCTGTTACTTCTAATGAAGCTACCACCTCTCATTCTCAGCCTGGCGAACACCTTCATAATATCAATAGGAGCATTCAGTGGGAAGGTTCAAGCCAAAATTCTACATGGAAATTAAATCCTAAAGAAGTTTCAGAAGAAATGGTAGTTAGCACTGAGAAAGCAAGTTGGATAAATAGAAGTGAAGAGGATAAGCAGGGAAACAATAATGAAGGTCCTAGCACTCATGTTGTACCAAATAATCTCTTACCAAGAGCGAATCATCCTTCATTCCTTGGCCTTCTAAATACTATGCCTCATGGCTTCCAATGGGAACCTTCTCCTAGTGATGCTTCTCATCAGTTGGGAAACAATGAATTTTCAAACCAAACAGACATACACAGCATTAACGTTGTACCTTTCCCAACATCAACATTATCTTTATCAACTGGGAATTCTCAAATTCTATGTCCTCCAGGAGCAACACAGACATATTTCCCTTCACATGTTACAGCCATGGACATGGATCCCAGACAAATCAACCACTATCGTATGTTGAGTTCAGATTCTCAAAATCCACTCACGAATTCTCTCAATTATTCTTTTAGCTTCGCTATGATGTCTCATAAACCTCTTGATTCACCCAACAGCAGCAAAAGCCCGTCTCATAAAGACCAAGATTTCCCTTCCAACTGA 1149 0.4064 MIPWNRILTITKTKDKTLQVATNNERHKMVIKSPKEADFPLKQEAHSQSIIDPEKAKVSSSSAAQLPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIVPSVNNFTLGYPFAVTSNEATTSHSQPGEHLHNINRSIQWEGSSQNSTWKLNPKEVSEEMVVSTEKASWINRSEEDKQGNNNEGPSTHVVPNNLLPRANHPSFLGLLNTMPHGFQWEPSPSDASHQLGNNEFSNQTDIHSINVVPFPTSTLSLSTGNSQILCPPGATQTYFPSHVTAMDMDPRQINHYRMLSSDSQNPLTNSLNYSFSFAMMSHKPLDSPNSSKSPSHKDQDFPSN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00649 382 ProSiteProfiles TCP domain profile. 83 141 IPR017887 -
Pste5g00649 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 41 337 IPR005333 GO:0003700
Pste5g00649 382 MobiDBLite consensus disorder prediction 213 237 - -
Pste5g00649 382 Pfam TCP family transcription factor 83 212 IPR017887 -
Pste5g00649 382 MobiDBLite consensus disorder prediction 361 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00649 Pste-Chr5 4188951 4190099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00649 70 336 TCP Transcription Factor Family AT3G02150 39.785 8.74e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste5g00649 TCP 5.4e-28 No_clan