Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00628 CTAGTGAGATCTTTCAAGGTCAAGCTCTCTTATACAGACACTTATATGGTTTCCTTGATTCTATGTGTCTTAAATTAATTGTTGAGCTTAGAATACCTGACATAATCAACAAGCATGGCCAACCCACTACTTTTTCAGAGTTGGTCTCAATTCTACAAGTTCCACCAGCCAAATTTAGTCAGGTGAAGAGTCTCATGCGCTACTTGACACACAATGGATTCTTTGAAAGAGAAGCATATGCTCTCACTGCTGCATCAAAACTCCTTGTCAAAGGCAGCGAACTTTGCTTAGCTCCAATGGTTGAGTGTATTCTTGACACAGCTGTTTCAGCTTCATTCCATCAAATGAAAAAATGGGTTTATGAGGAAAATCTATCACTGTTTGATATCACCTTAGGTTCTCATTTATGGGTTTTTCTTAACAAAAACCCTACATATAATGAGATATTCAATGAGGCAATGGCTAGTGATTCTCAAATGAGTAGCTTGGCATTGAGAGATTGCAAATTGGTGTTTGAGGGACTGGAATCCATTGTGGATGTTGGTGGTGGAACTGGAATCACAGCCGCGATTATCTGTGAGGCATATCCTAACTTGAAATGCATTGTGTTTGACGGTCCACAAGTTGTGGAAAACTTGCAAGGAAGCAAAAATTTGACATATGTTAGTGGCGACATGTTCAAATCTATTCCTAAGGCTGATGCAGTTCTGCTTAAGTGGATTCTACATAATTGGTCTGATAAAGAGTGTAGAAGGATTTCAGAAAATTGTAAAGAAGCAATTTCAAATAATGACAAAGGAGGTAAAATAATTATCATGGATGTTGTGATAAACGAAAAGCTTGATGATCACAAAGTTACTAAACTAAAGCTACTAATGGATGTTAACAAGGCATGTGTAGTTAATGGAAAAGAGAGAAATGAAGAAGAATGGAAGAAACTCTTCATGGAAGCAGGGTTTCCAAACTACAAAATATCTTCCTTAACTGGATATTTCTCTCTTATTGAGATTTATCCT 1016 0.3711 MCLKLIVELRIPDIINKHGQPTTFSELVSILQVPPAKFSQVKSLMRYLTHNGFFEREAYALTAASKLLVKGSELCLAPMVECILDTAVSASFHQMKKWVYEENLSLFDITLGSHLWVFLNKNPTYNEIFNEAMASDSQMSSLALRDCKLVFEGLESIVDVGGGTGITAAIICEAYPNLKCIVFDGPQVVENLQGSKNLTYVSGDMFKSIPKADAVLLKWILHNWSDKECRRISENCKEAISNNDKGGKIIIMDVVINEKLDDHKVTKLKLLMDVNKACVVNGKERNEEEWKKLFMEAGFPNYKISSLTGYFSLIEIYP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00628 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 316 IPR029063 -
Pste5g00628 318 PIRSF O-mtase 1 318 IPR016461 GO:0008168
Pste5g00628 318 Gene3D Vaccinia Virus protein VP39 69 318 IPR029063 -
Pste5g00628 318 PANTHER O-METHYLTRANSFERASE 1 303 IPR016461 GO:0008168
Pste5g00628 318 FunFam O-methyltransferase ZRP4 70 318 - -
Pste5g00628 318 SUPERFAMILY "Winged helix" DNA-binding domain 1 72 IPR036390 -
Pste5g00628 318 Gene3D - 1 68 IPR036388 -
Pste5g00628 318 Pfam Dimerisation domain 1 49 IPR012967 GO:0046983
Pste5g00628 318 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 318 IPR016461 GO:0008168
Pste5g00628 318 Pfam O-methyltransferase domain 92 299 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00628 Pste-Chr5 4053932 4055113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00628 1 316 Monolignol Biosynthesis Gene Families AT5G54160 30.909 1.02e-45 157