Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00622 CAAATATGGAGAGAAAAAGTACGCAACGGCAGAAAGCGAAAAGGGCATGCACGTCATCGTAGAAACTCTTGGCTTCCAAGGTAGGATAATAAAAATCCACTCTTTTTTGGAATCTCAATCACCCCACCACCCAAATTCCCATTTTTATCTTCCCCTGCATATTCCTTTCCTTTTTCGCCAAGAAAACCAACCCTTTCTTGCAAGGTGGCAACCACAATTCATCCAACGTGTGGTTTCAACACTGTTTCTGTGGGCCTTCTTCCCTTCCGATCCGCGTTCTTTCACCGTCTTTCTTTTCAAACACCATATTCCTTTCTTCTCTTCTCTTCTGTTCTGTTTTACGCATATGAATTCCATTTGAAATAAACACACAAACAAACAAACAAACAAACAAACCCTCCGTTTTTTCTTTTCTTTTCTTTTCTTTCTCTGTTGCCACTGTCTCTCGTTTTGGTGGTGGCACTGAGAACAAACGAAACGCTGCGTTTTGGTTTGATAGATGGGTAGGTGCCCTTGTTTCGGGTTGTGGAAGAGCAGAGGGAAGAGTAAGGCTCAGGAGGAAGACACCAAGAATCGGAAGGCTTTGGAGAATAGTAGTAATGTCTCTCCTTTTTCTTCAGGTTTTAAGTCAAGACATGGGGACAAGTTGTGTTTTTTAACTTTTTTGGATGACGTTTGTGTTGATTCTTGCTTCGGTTCTCGCAAGGACTTACACCAAAAGAAAACCCAACAGAAGAGAGTGACAGTTCTAATAAGGCCCAGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGAGATGAAACCTTTATTGGGCAAGGTGGATTTGGCACTGTTTATAAAGGAACAATTGGAAATTCCCAGCAGTCCTTCACTATGTTACATTGCTGTGCAATATGATTCCTTTAACAAGAGACTTGAGCAGGTTGTAGCGGTTAAAAGACTTGATACTACTGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTCCTACGCCATTCCAACCTTGTTAATATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAATACATGGCTTTGGGATCCTTAGAGTCTCATCTTCATGATGTTTCACCTGATGAGGAACCACTTGACTGGAATACAAGAATGATGATAGCTTGTGGGGCAGCAAAAGGACTAAATTATCTGCACCATGAAGCAAAGCCCTCTGTTATATACAGGGATCTGAAATCATCCAACATACTATTGGGTGAAGCTTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGTCCAACTGGAGATCAATCATATGTTGCCACTAGGGTGATGGGAACCCAAGGTTACTGTGCCCCTGAATATGCTACTAGTGGAAAATTGACAATGAGATCTGACATTTACAGTTTTGGAGTTGTGTTATTGGAACTAATTACTGGACGTAGAGCTTATGATGATAACCGCGGCCATGAAAAGCATCTTGTAGATTGGGTACGCCCAATGCTTAGAGACAAAAAGAGCTTTCCAAGATTGGTAGATCCAGAGCTTAAAGGTCGCTATCCAGGAACTGGTCTATCAATGATCCTTGAATTGGCAGCCATGTGTCTTCGTGAAGAGCCACGTCAACGGCCAAATGCAGGTGATATAGTGGATGCTCTAGAATTCTTGTCATCCAAGCATTATACTCCAAGACTATCTGACACAGTCAATACAAGTACAACAGAGGAGAGTGTAGAATCCCCAAATGAAACGACTGCGATTTTGCCTAAAGATTCGCAAAGAGAACGAGCTGTTGCAGAGGCCAAGCTGTGGGGGGAGACATGGAGGCAGAGACGACAAAGTGAGCAAAGTAATCCTGAAGTACTTAGTTAGGTGAAATTGAAATTCATTTTGTGTTGGTTATCTTGGTTACTACATGCATCATGATACCAAAGAAGATTCAACATACTTCAAGTCCAAGGGGAAGCAGAAAGAAAACGTTTGAAGCAGATTACAAGTGGCTGATATTAAAAAGGTATAGGAAAATTAAAGAAACTTCAAAAGATAATGTCAAAGATTTGAATGTAGCTTAAATAAAATTAGTTGGGCTGCTATTTTTAAATAGTGCTGTTTTAGGCACTTGTGAACTTGAGGCTCAACATGAGTTTTCAGATTTTGTGGTTGCTCTTGCATTGTTGCATTGAAAAATATGAAACATTCCTAGTATTTGTATGTTCTAACGTTGCTGTTGCATTGCTGCA 2262 0.408 MGRCPCFGLWKSRGKSKAQEEDTKNRKALENSSNVSPFSSGFKSRHGDKLCFLTFLDDVCVDSCFGSRKDLHQKKTQQKRVTVLIRPRYLPSESLQQQQKILEMKPLLGKVDLALFIKEQLEIPSSPSLCYIAVQYDSFNKRLEQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVNMIGYCAEGDQRLLVYEYMALGSLESHLHDVSPDEEPLDWNTRMMIACGAAKGLNYLHHEAKPSVIYRDLKSSNILLGEAFHPKLSDFGLAKFGPTGDQSYVATRVMGTQGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRRAYDDNRGHEKHLVDWVRPMLRDKKSFPRLVDPELKGRYPGTGLSMILELAAMCLREEPRQRPNAGDIVDALEFLSSKHYTPRLSDTVNTSTTEESVESPNETTAILPKDSQRERAVAEAKLWGETWRQRRQSEQSNPEVLS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00622 464 SMART serkin_6 115 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00622 464 Gene3D Transferase(Phosphotransferase) domain 1 199 419 - -
Pste5g00622 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Pste5g00622 464 MobiDBLite consensus disorder prediction 405 429 - -
Pste5g00622 464 MobiDBLite consensus disorder prediction 17 44 - -
Pste5g00622 464 PANTHER OS07G0668900 PROTEIN 139 404 - -
Pste5g00622 464 MobiDBLite consensus disorder prediction 405 437 - -
Pste5g00622 464 SUPERFAMILY Protein kinase-like (PK-like) 141 415 IPR011009 -
Pste5g00622 464 ProSiteProfiles Protein kinase domain profile. 102 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00622 464 Gene3D Phosphorylase Kinase; domain 1 133 198 - -
Pste5g00622 464 CDD STKc_IRAK 142 395 - -
Pste5g00622 464 FunFam Serine/threonine-protein kinase PBS1 198 413 - -
Pste5g00622 464 Pfam Protein kinase domain 136 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00622 Pste-Chr5 4011007 4022923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00622 146 450 Glycoside Hydrolase AT3G07070 56.013 3.25e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste5g00622 Pkinase 3e-41 CL0016