Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00609 CAATGATAGAAATATAAATGTGAAGGTACCTAACAACCATTTGGTGAGCCATCACTTGAACCTCAAAGAATTCCCTTCAAGAGGCTCTTTTTCTACATTACTACACATTCAATTCCATACAATTGAGCTGAAGAAACTCCAATCTCACTGAAAGAAAGTTGCTGACTCTTGGCACCAGTTATCATAGTCGATAACATCAAAGGCACAACATTCAGGGAATGAGGCTTGTCATATCAGCTGTATGTGTTGTTGTGCTATTCTCTTATGCAGCTGCGTATGATCCTTTGGATCCAAATGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTAGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGAGTTTGGGATGGACATGGGCAAAGAAGGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAACAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAAAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTGCCTTACAACCAGCAATTCTCAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGGCAAGACCCTTCATCAGCAGTCTCATCCTTCCAAGTGAGTGTGGGGCTAGCTGGTACATCAAACAAGACAGTTAAACTCCCTAAGAACTTTACTCTCTTGGGTCCAGGACCAGGCTATACTTGTGGCCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCAGACAAGCGCCGCAAGACTCAAGCACAGATGACCTGGAATGTTACTTGCACATACTCACAATTTCTGGCTAGAAAGAACCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACGCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAGAAACTGTGTCAAGAGTGATTCTAAACGTATCAACATGGTAGGGATTCACACTCCGAAGAGAGACAATGAGCCGTTGCTACAGTGCACTCATCATATGTGCCCAATAAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTATTGGAGAGTCAAGATTGCGGTAACAAATTTCAATTACCGGATGAATTACTCCCTCTGGACTCTAGCTGTTCAGCATCCAAATCTCAACAACGTCACACAAGTTTTCAGCTTTCATTACAAGCCTTTACTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGAATGAAATACTTCAATGATCTCTTAATGGAAGCTGGGCCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAGGACAAAGACACATTCACTTTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAACGGTGAAGAATGCATGCTGCCACCGCCTGATACCTACCCAATCCTCCCTAACTCTGCCCACGTGAACCTGTTTAACTTCGCAGCATTCATTTTTACAACAATGCTTGTCATGCTAGCTATTTGGTGAATTAGTACGTAGGCGACATACAATTGTTTTATGTGAAATTTTGAAGCCAAATTTTCCTACACACATAACGCACATCAGGTATGAACATTGTTAAACAATTGTTTGAAAACACCAAACCAGACTCATGAATATGTGTGCTGATAGAGTCCTGCATAGTGA 1676 0.432 MRLVISAVCVVVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWSLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQAQMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKRNCVKSDSKRINMVGIHTPKRDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFHYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPILPNSAHVNLFNFAAFIFTTMLVMLAIW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00609 432 PANTHER PROTEIN COBRA 7 424 IPR006918 GO:0010215|GO:0016020
Pste5g00609 432 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Pste5g00609 432 PIRSF COBRA 1 432 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00609 Pste-Chr5 3949184 3951713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00609 19 431 COBRA Gene Family AT3G29810 65.459 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00609 5 3949184 3951713 Pste9g00185 9 735143 737813 PCT