Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00595 ATGTTTCTGAAATGTTTGGGTGGCAGAAGTTCATCTGAGAGACACTGTCGAACGGTAATTGAAGAGCTTTGCCATCAATTTTCTCTGGGCGATCTGAGGAAGTCAACAAACAATTTTGATGAATGCAGAGTAATTGGACGTGGAGCATTTAGCAAAGTGTATAAAGGTTGTCTCCAACATAAAGATGGTTCTGATTATACAGTGGCAGTGAAGCGATTTGATGTGGAATACAGCCAAGTGTTCAAGAAAGAAATAGAGTTGCTTTGTCAGCTTCACCACCCTAATTGTGTCTCTCTTATAGGATTCTGCAACCACCAAAAAGAGAAGATTATTGTGTACGAGTACATGTCCAATGGATCTCTAGATCGACACCTACTGTATGGCCAACTTTCATGGAAGAAAAGGATGGAGATATGCATAGGAGTAGCGCGTGCATTGCACTACCTTCATACAGGAGCCAAACGCTCCATCTTTCACTGTATCCTCAGAGCCAGTACCATTCTTTTGGATGATCGAATGGAGCCAAAACTCACAGGTTTTGGCCTTAGCGTACAGGGACCACGATTTAATTCAAAGCCCAAACAGATTAACCCAGATCATATTATGGGAATTCTTGGCTACACGCCCTTGGAGTATGTCATGGACGGTACCATCACAGATAAATGGGACGTTTTCTCATTTGGTTTCGTTCTACTACAACTTGTATGTGGAATCAACTATTCCATCATCTCTGCAGATAGGGAGCCTGTTGAGAAGAATATTGATCCGAATATCAAAGGAAAGATTACACCAGAGTGTTGGCAAGTCTTTACAGATATCATGGTCAGATGCTTCAAGTATGCACCAGATGAGCGACCAACAATGGGTGAAGTGGAGGTAGAATTCGAACATGCTTTGTGCTTGCAGGAACAAGCAGATATCACAAACACTAACTCTGATTATACCTTATTCTCCAAGACCATTATTTCCATGCCCGTGAGTGAAATGAAACTGCAGTCCAACACACAAGACAGTGATACATACAGAAGAAATGTAGGTGATTTGGTCTGCTGGTAA 1056 0.4186 MFLKCLGGRSSSERHCRTVIEELCHQFSLGDLRKSTNNFDECRVIGRGAFSKVYKGCLQHKDGSDYTVAVKRFDVEYSQVFKKEIELLCQLHHPNCVSLIGFCNHQKEKIIVYEYMSNGSLDRHLLYGQLSWKKRMEICIGVARALHYLHTGAKRSIFHCILRASTILLDDRMEPKLTGFGLSVQGPRFNSKPKQINPDHIMGILGYTPLEYVMDGTITDKWDVFSFGFVLLQLVCGINYSIISADREPVEKNIDPNIKGKITPECWQVFTDIMVRCFKYAPDERPTMGEVEVEFEHALCLQEQADITNTNSDYTLFSKTIISMPVSEMKLQSNTQDSDTYRRNVGDLVCW 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00595 351 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Pste5g00595 351 Gene3D Transferase(Phosphotransferase) domain 1 116 320 - -
Pste5g00595 351 ProSiteProfiles Protein kinase domain profile. 39 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00595 351 Pfam Protein tyrosine and serine/threonine kinase 43 292 IPR001245 GO:0004672|GO:0006468
Pste5g00595 351 FunFam Receptor-like protein kinase ANXUR2 116 317 - -
Pste5g00595 351 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Pste5g00595 351 Gene3D Phosphorylase Kinase; domain 1 7 115 - -
Pste5g00595 351 SUPERFAMILY Protein kinase-like (PK-like) 15 292 IPR011009 -
Pste5g00595 351 PANTHER OS07G0166700 PROTEIN 24 302 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00595 Pste-Chr5 3870252 3871371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00595 10 306 Receptor kinase-like Gene Family AT3G51550 38.889 3.74e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste5g00595 PK_Tyr_Ser-Thr 7.5e-41 CL0016