Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00592 CGTCATTTCCACAAACACCTCGCAAACCAAACCCTAGTGTTGGTAATCAAAAACCTCCCATTCGATGCTCACCCGCCACCGTCACCACCGTCACACCCTCCATGGACAAACGACGCCGTCACGGAGTTCTTCCGCTGGGTCGAGGCCCGCTTCGCCTTCGCCCACTCCGAAACCACGTGCCGCGAACTCGCCTCCCTCCTCGCCCGCGCCAACCTCACCAAACCCCTCTGGAACTTCCTCAAACACTGCGGTCACGTGACCACCGCCACCGTCACGTGCGTCATCACACTCCTCGGAGAAGAGGGTCTCGCCGACGAAGCGTTGCTCACCTTCCACCGAATGAGGCAGTTCCGCTGCAACCCAGATACCCAATCTTACAACACGCTGATCCACGCGCTCTGCCGCGTGGGAAAGTTCGATAAAGCTCGTTACTTGCTCCAGCAAATGGAGCTTCCCGGGTTCCGCTGCCCGCCGGATACCTTCACTTACACGATTCTCATAAGCGCTTATTGCCGCCACGGCATGCTCACCGCTTGCCGGAAGGCCACGCGCCGCCGCATTTACGAGGCCGGGCGCCTCTTCCGGTTGATGCTTTTCAAAAAGCTTCTCCCTGATGTTGTTACTTACAATGCCCTAATTGATGGGTGCTGTAAGACTGGGCGCGTGGAGAGGGCCATCGAGTTGTTTGATGACATGAAAAAAAGGGGCGTTGTTCCCAATCGTGTTACTTATGGCTGTTTTGTTAGGTACTATAGTGTTGTGAATGAGATTGATAAGGGTGTTGATATGTTGAGAGATATGCAGAGGTTGGGCCATGGAGTTCCAAGTTCGAGTTTGTATACTCCCATCATTCACGCACTTTGCGAGGCTGGGAGGGTTGTTGAGGCTTGGTGGTTTCTTGTTGAGATGGTTAATGGAGGGTCTGTGCCCAGAGAGTATACTTATAAGTTGGTTTGTGATGCACTCTGTGCAGCCGGAGAGGGTGGGTTGTTGGAGGATGATGATGGGTTGCATAAGAGAATTATGGATGGCATATGGAAAAGGTACAGGCAAGTGATGAAAGTGAAACCCATTATGGGTCGCAGGGGCTATCCTGAGATGGAGGAACAGGAATGTGGTTTTGTTCAAATGATTATTATTGAGCTAGTGGAGGATCTTGATTCTTCAAATGCAGGTATTCCACATCATAGGTACTATTGTTTTGCTTCCAAAATATGTTTTACCTTGATATGTGGA 1236 0.5146 RHFHKHLANQTLVLVIKNLPFDAHPPPSPPSHPPWTNDAVTEFFRWVEARFAFAHSETTCRELASLLARANLTKPLWNFLKHCGHVTTATVTCVITLLGEEGLADEALLTFHRMRQFRCNPDTQSYNTLIHALCRVGKFDKARYLLQQMELPGFRCPPDTFTYTILISAYCRHGMLTACRKATRRRIYEAGRLFRLMLFKKLLPDVVTYNALIDGCCKTGRVERAIELFDDMKKRGVVPNRVTYGCFVRYYSVVNEIDKGVDMLRDMQRLGHGVPSSSLYTPIIHALCEAGRVVEAWWFLVEMVNGGSVPREYTYKLVCDALCAAGEGGLLEDDDGLHKRIMDGIWKRYRQVMKVKPIMGRRGYPEMEEQECGFVQMIIIELVEDLDSSNAGIPHHRYYCFASKICFTLICG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00592 412 Pfam PPR repeat 280 307 IPR002885 -
Pste5g00592 412 Pfam PPR repeat 90 119 IPR002885 -
Pste5g00592 412 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 122 156 IPR002885 -
Pste5g00592 412 Gene3D Tetratricopeptide repeat domain 37 152 IPR011990 GO:0005515
Pste5g00592 412 Gene3D Tetratricopeptide repeat domain 275 333 IPR011990 GO:0005515
Pste5g00592 412 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 276 310 IPR002885 -
Pste5g00592 412 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 87 121 IPR002885 -
Pste5g00592 412 Pfam PPR repeat family 204 247 IPR002885 -
Pste5g00592 412 Pfam PPR repeat family 121 172 IPR002885 -
Pste5g00592 412 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 205 239 IPR002885 -
Pste5g00592 412 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 88 181 - -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 90 123 IPR002885 -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 242 272 IPR002885 -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 125 150 IPR002885 -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 207 240 IPR002885 -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 161 180 IPR002885 -
Pste5g00592 412 NCBIfam pentatricopeptide repeat 279 310 IPR002885 -
Pste5g00592 412 Gene3D Tetratricopeptide repeat domain 154 274 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00592 207 345 Miscellaneous Gene Families AT4G11690 33.094 9.38e-13 67.8