LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g00581	ATGGAGAATAACGATAACCTAGCGGAGAATTCGGGTGGTAACAATGTCGATGACACGGTACCTTCTTCGACGCACGATCACGATGACGGTGCCGCCGCGGAAGCCGCACCGTCGTCTCCGAAGGAGCATGATCCGGCGGAGGAAGAGAAGAAGAAAGAAGAAGTCGCTCCTCCTCCGCCGGAGAAAGTTTTGGAAGAGATTGATCGATTTCTCGTGACTCTGCAGCAGAGAAGCGATGGAGGTGCGGCGAATTTTGAGATTCCTGGCTTCGTTGAGAGGTATTTGGATATGGTGGAAGAGAAGATGGTGAAATACGGCGGCGTAGGTAAAGCGAAATGGGGACAGGTGGCGGAGGAAGATTCGTGGTTGATTGAAACCGCGGATCGGATTTCGAAGCTGATGATGTTGCAGAACGATCATCATATCAACGGTGGAAAAGACTCGCTGGTTAACCGTGTGACATCGATTCACCAGCGTGTGATGTCGCTTTTGGAAGAGGATTTTCGGTTTCTCATGGAAGAATGTAGAATGCCAACCGAATTGGATCCTGGAGGAAATAATAATAACAATAATAACAACAATAGCAACAACAGCAGTAACCATGGCAAAAGAAAACAAGATCAGGAATGGGAATACGACACGAATTTCCCGGGTTACACGGAGGAGGCGATTTCCGGCATGAGTAAGATCGTCACGGCGATGATCTCCGGCGGCTACGAATCGGAGTGCTGCCAGTTGTACATCATCTCACGGAGAAACGCCTTCGAGGAGATTCACAACAAGCTAGGGTTAGAGAAGATCAGCATCGACGACATGGTGCAGAAGATCCCGTGGGAGACTCTCGCCAGGGAGATGATCCCAGCGTGGACCAACACGTTCAAGCAGTGCGCCTGGGTGTACTTCCCCGGCGAGAGAAAACTTGCCGAGGAAATTTTCGTGTCGAGCCCTAACACAGCGAGAGGGCTCTTCAGCAATCTCTCCCGCGGTGTGGTCATCCAGCTTCTAAATTTTGCAGAAGGAGCTGCGATGACCAAACGTGCGGGAGAGAAGCTCTTTAAGCTCCTCGACATGTACGAGACCCTCCGACAGACAATTCCTATAGTGAAAAAGTTTGTGCCGGAGGAATCTGTGGAGGAGATAAAGACAGAGATATGTCTGGCCAAGTCACGACTTGGCGAGACGGGTATCTCCATCTTTTGTGACTTGGAGAACCAGATCAAATCGGATCCGACAAAAACTGCTGTCCCCGGTGGTGCAGTGCACCCGATCACACGCTACATTATGAATTATCTCAACACAGCGGGTGATTACAAGGAAACTCTGGAGCAAGTGTTTAGGGAGCATTCACAGACCGAGCGTGCAGATTCAACAAGCAAACTGCAGCGTGAAAAAGACGGTGCTTTGGAGAGGGAAACGGTGTCCCCTTTCGCTGGGCAAGTTATGAGGGTGATGGAGCTGCTAGACTCGAGCCTGGACGGAAAAGCGCGTCTGTACAAAGACGTGTCGCTGAGCAACTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAAGGGTCGAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATAAGGAAGAAGTCTTCGGATCTGAGAAACTACCACAAGACATACCAAAGAGAAACGTGGAGCAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGAGCGTGAACGGGAAGGTGCACAAGCCTGTGCTGAAGGAAAGGTTCAAGAGCTTCAACTCGTTGTTCGACGACATTCACAAGACGCAGAGCTCGTGGGTGGTGAAAGATGAACAGCTTCAGTCGGAGCTTAGGGTTTCTATCTCTGCAGTTGTCATTCCTGCATACCGATCCTTCATTGGGAGATTTGCACAGATTTTTGACCCAGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGATATAGAGACTAAAATTGATGAATTGTTCGATGGGAAACCTCATCAGTCCATGGCTAGAAAGAGAACATAA	2010	0.496	MENNDNLAENSGGNNVDDTVPSSTHDHDDGAAAEAAPSSPKEHDPAEEEKKKEEVAPPPPEKVLEEIDRFLVTLQQRSDGGAANFEIPGFVERYLDMVEEKMVKYGGVGKAKWGQVAEEDSWLIETADRISKLMMLQNDHHINGGKDSLVNRVTSIHQRVMSLLEEDFRFLMEECRMPTELDPGGNNNNNNNNNSNNSSNHGKRKQDQEWEYDTNFPGYTEEAISGMSKIVTAMISGGYESECCQLYIISRRNAFEEIHNKLGLEKISIDDMVQKIPWETLAREMIPAWTNTFKQCAWVYFPGERKLAEEIFVSSPNTARGLFSNLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYETLRQTIPIVKKFVPEESVEEIKTEICLAKSRLGETGISIFCDLENQIKSDPTKTAVPGGAVHPITRYIMNYLNTAGDYKETLEQVFREHSQTERADSTSKLQREKDGALERETVSPFAGQVMRVMELLDSSLDGKARLYKDVSLSNFFMMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSDLRNYHKTYQRETWSRVLQCLNHEGLSVNGKVHKPVLKERFKSFNSLFDDIHKTQSSWVVKDEQLQSELRVSISAVVIPAYRSFIGRFAQIFDPGRQTEKYIKYQAEDIETKIDELFDGKPHQSMARKRT	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g00581	669	Gene3D	Exocyst complex component Exo70	112	666	-	-
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	1	20	-	-
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	182	201	-	-
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	179	208	-	-
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	40	62	-	-
	Pste5g00581	669	SUPERFAMILY	Cullin repeat-like	124	657	IPR016159	-
	Pste5g00581	669	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	64	658	IPR004140	GO:0000145\|GO:0006887
	Pste5g00581	669	Pfam	Exo70 exocyst complex subunit	289	654	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	1	62	-	-
	Pste5g00581	669	MobiDBLite	consensus disorder prediction	448	468	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g00581	Pste-Chr5	3760191	3762200	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g00581	2	669	EXO70 exocyst subunit family	AT5G13990	47.539	0.0	603