Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00551 GAACAAGTCTCCAACTCAGACCTCTTCTTCCACTTTTTCTCAGTTTTCATTTCCCTTTCCACCTTCTTTCTCTCTTCTTCTCATTCCTTGTAATACAACTGCAATAACTCGGAGCTGTTTTCTCAATCAAGTGACTCTCTCTAGTGCTAGTCTCATGCAAGATGATTGAGTTGTTTGAACATCAACAAAGTTCAAGGAATGGTTGATCAAGCAGATTTAGTTATCATTTGTGCCTCTGTTGGGGTGGCCCTTGGAGTTTTGATTGCTTGCCTCGTATATTTTGGCATAAGGTGGTACAAGAAGCGAGCTCATGTTAGCCGATCTGTGAATGACCCTAGTTTAACAACAATCCCAATACGAACACATGGATTAGGAACAAGCACTGCATTCAGTGCTTCCCTCTCTAGTTCCATATCCGCTTCAAGGTCACCATATCCTCAGAAAAGCTCGCATTCAACTTGGTGGAATCATCAAAATAAAGATGGCTTTGCTTCAACATCGGGCATTCCAAAGTACTCGTACAAAGAAATTCAAAAGGCCACACAAAATTTCACAAATACATTAGGAGAAGGATCATTTGGTACAGTTTATAAAGCCATGATGCCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGCTCCCAATTCTAAACAAGGGGAGAAAGAATTTCAAACAGAGGTGCTTCTGCTAGGAAGGTTGCATCATCGGAATCTTGTAAATTTGTTAGGATACTGCATAGATAAAGGACAGCTTATGCTGGTTTATGAGTTCATGAGTAATGGAAGTTTAGAAAACCTTTTATATGGTAAGCAGCAGATCTTTCATTTGGTGTTGCGCATGCATGTAGGTGAAGAAAAGGAATTGAGTTGGGAGGAAAGACTGCAGATTGCTATTGATATTTCACATGGAATAGAATACCTTCATGAAGGGGCAGTACCACCTGTCGTACATCGTGATTTGAAATCAGCTAATATATTGCTAGATCACTCAATGAGAGCTAAGGTTTCTGATTTTGGGTTCTCAAAGGAAGAGATCTTTGATGGCCGTAATTCTGGCCTTAAAGGTACATATGGATACATGGACCCAGCATATATTTCCTCAAGCAAGTTCACAGTGAAAAGTGACATTTACAGTTTTGGTATAATAATTTTTGAGCTCATCACTGCCATCCACCCACATCAAAATTTGATGGAATATATCAACCTTGCTGCTATGGATTATGATGGTGTCGATGGGATTCTTGACAAGCAACTTGTGGGGAAATGCAATCTTGAAGAAGTGCGAAAGCTAGCTAAAATTGCCCATAAATGTTTGCAGAAATCACCTAGAAAACGCCCCTCAATAGGCGAGGTTTCGCAGGGTATATTGAGGATTAAGCAAAGGTGCCTCATGAAAGAAGACACCATGTTATTTGCAAGCAGCAACTTCTCCCAAAGCGTGAGTCAAATTGAGGAGCAACAGGTTGAATTAAGTAGAATAACCACCAATCCACCATGAGCCATAGAGAAATGCGGTGAATACATATTCCATATATTATAAGGTGAAAATTCTTTTTGTAGACAAGGAAAGGAGGTTTGTAAATCCCCGAATGTCATTTAGCTGCAAAATATGAGTCAAGATGTACAGATTACAAGAGCAGATCTCATGCTATTCTGAAACATGATTTTCATTTGTGAATAACCACTTCTGTCTTGTGTTGTGAGTTCTCGTAGGTAAACTAACTAACACAAATAAATTCTATATTTGACCATAAATCCTCTATACCCATAAATGTACGTTTACTGTAAAACAAATAAAGATGACAAGGTTGAAGGAAAGGGAAATGCTTCCTTTTTACTCAGACCAGTAAGAGCTGGGAAGATTTGTTGGTAGCTCACAATGTCACACCTTATATATGGAGTATGAGAACTAAAAGAGTACAAAAAATGTGGA 1932 0.3908 MVDQADLVIICASVGVALGVLIACLVYFGIRWYKKRAHVSRSVNDPSLTTIPIRTHGLGTSTAFSASLSSSISASRSPYPQKSSHSTWWNHQNKDGFASTSGIPKYSYKEIQKATQNFTNTLGEGSFGTVYKAMMPTGEVVAVKMLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCIDKGQLMLVYEFMSNGSLENLLYGKQQIFHLVLRMHVGEEKELSWEERLQIAIDISHGIEYLHEGAVPPVVHRDLKSANILLDHSMRAKVSDFGFSKEEIFDGRNSGLKGTYGYMDPAYISSSKFTVKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDYDGVDGILDKQLVGKCNLEEVRKLAKIAHKCLQKSPRKRPSIGEVSQGILRIKQRCLMKEDTMLFASSNFSQSVSQIEEQQVELSRITTNPP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00551 432 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 413 - -
Pste5g00551 432 SUPERFAMILY Protein kinase-like (PK-like) 84 386 IPR011009 -
Pste5g00551 432 CDD STKc_IRAK 122 392 - -
Pste5g00551 432 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Pste5g00551 432 Gene3D Phosphorylase Kinase; domain 1 81 191 - -
Pste5g00551 432 FunFam Leucine-rich repeat receptor-like protein kinase 93 191 - -
Pste5g00551 432 Pfam Protein tyrosine and serine/threonine kinase 118 386 IPR001245 GO:0004672|GO:0006468
Pste5g00551 432 SMART serkin_6 116 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00551 432 ProSiteProfiles Protein kinase domain profile. 116 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00551 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pste5g00551 432 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 400 - -
Pste5g00551 432 Gene3D Transferase(Phosphotransferase) domain 1 192 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00551 Pste-Chr5 3576172 3581030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00551 107 431 Receptor kinase-like Gene Family AT4G02010 38.261 1.15e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pste5g00551 PK_Tyr_Ser-Thr 1.7e-50 CL0016