Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00547 CTCACACCTCACCATTCTGCAATCTGCAATCTGCACTTTCTTTACAAAAGCTTACATTCCAATTCCATAATTGCCCTTACCCCTCAATGTGCATTTAACCATTCCATTTCAACACTAGTCTCTACATCATCCCATTCACTCCCACACATCAGATCTTCATTTTTGTTTTGAAATCCTAACTCCAGTAACAAAATCTCTCTTTTACCATCGTCAAATTATTTCAATTTAACCAATCATATCCAAGTCTAAGTCTTGATATGCATCTGTTTTTACCGTGTGGATCAACTGAACTTATTCTATTAACAAGTGATATCGAATTTGAGTTTTGATATACACATAGTGACTAGGAGAGGAGAGCATTGTCCAACTATAGTGATCTTTCATTTTGCAAATTCCTTAATCTTTCATTCTTCTTTGTCTCTCTTTCAAGTTCCAACTCTAAAAATTACAATTTTTCCATCACTTTCTCTTGCTTAAGCACAAGTTTCAATCTTTTCTTGCCCCGCTTCTAAAATCACGTTTTTTTTTTCTTCTGGATATTATTTTTGAGATTCAGAAGAGTACCAAAGTTTGGGTCTTTTCAACAGCCCTTGAATCTTTTCCTTCCAAGAAGATAGCCAATGTGGGATGTTTTCGTGGCTTGCAAGTCTTGTTTCGTCGTGCTTGAGGCCTGTGAGGCGCTATGCCCGCATGAACAATGATGAGGATGATGTTGATGAATCTACTTCATCCATTGAAGACTCTCTTCTGTGGCGAAGAGACCTTGAGAAGCATTCTTGTGGTGAATTCTCCTTCGCTGTGGTTCAGGCCAATGAAGTTATTGAGGATCATAGCCAGGTTGAGATTGGCTCTGATGCCATCTTTGTTGGGGTTTATGACGGCCATGGTGGTCCTGAAGCTTCCCGGTTCGTCAGAGATCACCTCTTCCAGCACTTGATGAGGATTGCTCGGGATAATGGAACTATCTCCGAAGAAATACTCAGGGGTGCTGTTTCTGCTACAGAGGATGGATTTCTGACTCTTGTTCATAGGAGTTATATGATAAAGCCATTGATTGCATCAATTGGTTCATGTTGTCTGGTTGGTGTTATCTGGAAAGGAACTCTATATATCGCCAACTTAGGAGATTCCCGTGCTGTTATTGGTTCTGTAGGTAGATCTAATAAGATCTTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGTAGGGAGGAGATTAGACAAGAACTTAGGGCTTTGCATCCACAAGATTCACAAATTGTAGTTATGCATCGTGGAACATGGCGTGTTAAAGGCATCATCCAGGTATCCAGATCCATAGGAGATGCATATTTGAAGCGGCCACAGTTCTCTCTTGATCCATCGTTCCCACGGTTCCGCTTGCCTGAACCTATTACCCAACCTGTTCTAACAGCAGAACCATCTCTATGTTCAAGAGTTTTGCAGCCTCATGACAAATTCCTTATATTTGCATCCGATGGACTTTGGGAACACATGACAAATCAGCAAGCAGCTGAGATTGTTCATAAGAATCCACGCAACGGTGTTGCAAGAAAACTTGTTATGGCTGCTTTAAAGGGGGCAGCTAATAAAAGGAAAATGAAATATAAAGAGCTTCAGAAGATTGAGAAAGGGAACAGGAGGATTTTTCATGATGACATCACTGTGATTGTTGTCTTCATAGACCATGAGTTGCTTGAGAAGAAAGTTACTGTGCCAGAGTTGTCCATCAGAGGGTTCATTGACTCGGCTGGACCATCAAATTTTACATGTGCCCATGAGTTTATGTGATCCAAGGGTTATTTTTTCTAGAACTATAGCAAATAAAGTTGATTGGCTCTGCCTAAGTCTAATTTTGGTTCATTAGAAAAACAAGAATCTATGACATCCCACTTACACAGTTTTGTAGCATACTATTGTTGTCTATTTTGAGTATTTCTTGG 1943 0.4009 MFSWLASLVSSCLRPVRRYARMNNDEDDVDESTSSIEDSLLWRRDLEKHSCGEFSFAVVQANEVIEDHSQVEIGSDAIFVGVYDGHGGPEASRFVRDHLFQHLMRIARDNGTISEEILRGAVSATEDGFLTLVHRSYMIKPLIASIGSCCLVGVIWKGTLYIANLGDSRAVIGSVGRSNKIFAEQLTREHNASREEIRQELRALHPQDSQIVVMHRGTWRVKGIIQVSRSIGDAYLKRPQFSLDPSFPRFRLPEPITQPVLTAEPSLCSRVLQPHDKFLIFASDGLWEHMTNQQAAEIVHKNPRNGVARKLVMAALKGAANKRKMKYKELQKIEKGNRRIFHDDITVIVVFIDHELLEKKVTVPELSIRGFIDSAGPSNFTCAHEFM 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00547 387 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Pste5g00547 387 ProSiteProfiles PPM-type phosphatase domain profile. 53 352 IPR001932 -
Pste5g00547 387 CDD PP2Cc 54 352 IPR001932 -
Pste5g00547 387 PANTHER PROTEIN PHOSPHATASE 37 350 IPR015655 GO:0004722|GO:0006470
Pste5g00547 387 SUPERFAMILY PP2C-like 59 353 IPR036457 -
Pste5g00547 387 Gene3D - 20 362 IPR036457 -
Pste5g00547 387 Pfam Protein phosphatase 2C 74 317 IPR001932 -
Pste5g00547 387 FunFam Probable protein phosphatase 2C 42 44 360 - -
Pste5g00547 387 Coils Coil 183 203 - -
Pste5g00547 387 SMART PP2C_4 47 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00547 Pste-Chr5 3551037 3554672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00547 1 381 PP2C-type Phosphatase Gene Family AT5G06750 67.866 0.0 531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00547 5 3551037 3554672 Pste5g00547 5 3551037 3554672 ECH
Pste5g00547 5 3551037 3554672 Pste3g02921 3 22017117 22025319 ECH
Pste5g00547 5 3551037 3554672 Pste4g02895 4 20440416 20445773 PCT