Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00519 TGCACCAAGAAGTACAACCCCCTTGCCACATTTTTACGGCATCTCCACTCTTCAGTTGAAGCCAAAGTGTTAAAGAAGGCAGCAAAACGCACTGTAACCGCTCCACTCGATGACCAAACGCTCCATGGACAGCAGAAACGTCGTCGTTTGCGACAACGGAACCGGGGTACTCATCTTCTCCATCACCGTCGCATTGCAACGGATCTTGCCAAATTTCCACCGTTAACTCAGTGCATCATTTACTTCAACGATCCCTATGCTTATGTGAAGTGTGGTTTTTCTGGGGAGAATTTCCCAACCTCGGTTTTTCCTTGTGTAGTTGGAAGACCAATGCTCCGTTACGAAGAATCACTCACCGAGCAAGAACTTAAGGATATTGTTGTTGGCGAAGGGTGTGCAGACTTGCGGCATCAGCTTGATGTATCTTATCCTGTGAACAATGGCATCGTGCAAAATTGGGATGATATGTGTCATATTTGGGATCATGCGTTTTACAATGAATTGAAGATTAATCCTCCGGACTGTAAGATTCTACTCACGGATCCGCCTCTCAATCCTTCAAAGAATCGCGAAAAAATGTACAATTTTGCTGGAGTGTTTATCCAAATCCAAGCTGTTCTAACATTATATGCTCAAGGTTTGCTGACTGGATTAGTTATTGACGCGGGTGATGGCGTCACTCATGTGGTTCCAGTTGTTGATGGATATTCCTTCCCTCATCTAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTTGTTGATTTGCTTTCAAGGAGGGGGTATGCATTAAATAGGACTACTGATTTTGAGACTGTTAGGGAGATCAAAGAGAAGCTATGCTATATAAGTTATGACTATAAGAGGGAATATCAGTTGGGGCTTGAGACCACTATCCTTGTTAAGAACTACACTGAACTTATAGATGTAGAAGGTGATGGAATGGCTGACATGGTATTTCGCTGCATTCAGGAAATGGATATTGACAACCGGATGATGTTATATCAACACATAGTTTTAAGTGGAGGGAGCACCATGTATCCTGGATTACCAAGCCGACTGGAAAAAGAAATACTTGATCGTTATCTTGATGTTGTCCTGAAGGGTAACAGAGACGGATTGAAGAAATTACGACTAAGAATTGAGGATCCACCACGTAGAAAGCACATGGTGTACCTTGGAGGTGCTGTCCTTGCGGGAATAATGAAGGATGCACCAGAATTTTGGATTAACAGGGAAGATTATCTAGAAGAAGGGATTGCTTGTCTAAGTAGGTGTGGCCAGGCTTGACTTTGAAGTCCGTGAAGGCTGTGAAAATTTGAGATCATTTTGGGAAGCAAAAGCACCCGAGGCTAAGTGATGAAATATTCCAACCTGTTAGAACTGCCTCCCAAAATAGCTTGCATTAATTGCTGTTGGCATAATATAGCTGACCCTATGGCTACTATAGGTTAGGTGCGATTGTATAAGCACTCATCTTTTCGTGACAGATACGACAGCAGAATTCTTGTACGTGTTTTTGTAACAAAAATTATCGCAACTATGTGGCATAATTGTTGAATAAAGAATACATTGTAAATTTTGTAACTGTTCCAGTTCTTTATATTTTGTTGAGAGAGCTTGTATTACAGATCTATGCGGGCAATAGCCAATTAATGGATTATATAGTCTATTTATGGGTATGCATTATGTTCCCCATGTTTGGAATGTCTTGAG 1725 0.4151 CTKKYNPLATFLRHLHSSVEAKVLKKAAKRTVTAPLDDQTLHGQQKRRRLRQRNRGTHLLHHRRIATDLAKFPPLTQCIIYFNDPYAYVKCGFSGENFPTSVFPCVVGRPMLRYEESLTEQELKDIVVGEGCADLRHQLDVSYPVNNGIVQNWDDMCHIWDHAFYNELKINPPDCKILLTDPPLNPSKNREKMYNFAGVFIQIQAVLTLYAQGLLTGLVIDAGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYALNRTTDFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNRDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYLEEGIACLSRCGQA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00519 432 Pfam Actin 316 426 IPR004000 -
Pste5g00519 432 Pfam Actin 88 294 IPR004000 -
Pste5g00519 432 CDD NBD_sugar-kinase_HSP70_actin 142 256 - -
Pste5g00519 432 FunFam Actin, alpha skeletal muscle 76 229 - -
Pste5g00519 432 Gene3D Actin; Chain A, domain 4 247 315 - -
Pste5g00519 432 PANTHER ACTIN 92 422 IPR004000 -
Pste5g00519 432 SUPERFAMILY Actin-like ATPase domain 87 220 IPR043129 -
Pste5g00519 432 Gene3D - 205 393 - -
Pste5g00519 432 MobiDBLite consensus disorder prediction 35 55 - -
Pste5g00519 432 Gene3D - 88 422 - -
Pste5g00519 432 PRINTS Actin signature 207 226 IPR004000 -
Pste5g00519 432 PRINTS Actin signature 98 107 IPR004000 -
Pste5g00519 432 PRINTS Actin signature 135 157 IPR004000 -
Pste5g00519 432 SMART actin_3 76 430 IPR004000 -
Pste5g00519 432 SUPERFAMILY Actin-like ATPase domain 213 427 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00519 Pste-Chr5 3422002 3430114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00519 89 428 Miscellaneous Gene Families AT2G42100 39.459 7.36e-93 283