Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00518 ACAAAGCCAAGAGAACAAGTAGCTGATGCAAAAGCTCTTCTGGACATCACCCAATCCTTGGTAATGATTGGCCCAATGGAAGCCGAATTAAAGCAGAGGAAGGTCATTAATCAGCGAAAGCATGTGAGACCAACTGAATTGACACGGCCTGAAGAGCTTGGTGGAGATTCAGGCGAAGAGAGAACAGAGACTGATAAGCATATGTTAACTATGTTTAACATCTTAAGGATAAATAAAGTTGTGAAGCTTGAAAATCTGGTTTTGAATCGGAACTCGTTTGCACAAACGGTGGAGAATTTATTTGCTCTGTCCTTTTTAGTCCGAGATGGGCGGGCAGAAATAAAAGTGAATGAGGCTGGATGTCAACTAGTTTTGCCAAGGAATGCTCCTGCTGCAAATTTAGTTCTCTCCAAGGATGTTGCTGTCAGCCACTTTGTATTCCGATTTGACTTCAATGATTGGAAGGTATTTCTTTTTTGTAATTGCTTGTTATATTAA 498 0.4056 TKPREQVADAKALLDITQSLVMIGPMEAELKQRKVINQRKHVRPTELTRPEELGGDSGEERTETDKHMLTMFNILRINKVVKLENLVLNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGCQLVLPRNAPAANLVLSKDVAVSHFVFRFDFNDWKVFLFCNCLLY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00518 165 PANTHER UNCHARACTERIZED 21 155 IPR027786 GO:0005634|GO:0006281|GO:0030915
Pste5g00518 165 Pfam Nse4 C-terminal 81 155 IPR014854 -
Pste5g00518 165 MobiDBLite consensus disorder prediction 41 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00518 Pste-Chr5 3411445 3412724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00518 21 157 Non-SMC Element family AT1G51130 59.124 2.98e-53 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00518 5 3411445 3412724 Pste5g00518 5 3411445 3412724 ECH