Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00516 ATGCAGGGCAGGGAGATGACAGGAGTGAATTATTTACTCCCTTCAGACGCAAGTCCTTACCCAGGTCACTACAGCATGGTTGAGAACAGCATCCCCATATTTGAAGTCCACAAACTCTCAAACCAATTGTATGGTTTCCAGAAGTGTCCTCAAGTGGTTGCAGAGTTGAGCCCCCCACAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAACAGCAGCAAAGTCTTATCAATGAGAGGAAGCACAGAAGGATGATATCGAACCGGGAGTCGGCCCGGCGGTCACGCATGAGAAAGCAGAAGCACCTTGATGAACTGTGGTCGCAGGTGGTTTGGCTCAGGAATGAAAATCACCAGCTAATGGACAAGCTCAACCATGTTTCTGAGTCACATGATAGAGTTGTTCAGGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACACTCCATATCACCCTCCTTCCCTCAGCCCCATTCAAGATGATTTCTCTCCCTATGTCAAATCTGATTCCTCAATCTCAAGCTCTATGGACCTGCTTGCTTCAATTTGA 594 0.4747 MQGREMTGVNYLLPSDASPYPGHYSMVENSIPIFEVHKLSNQLYGFQKCPQVVAELSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDRVVQENVQLREEASELRQMICDMQLHTPYHPPSLSPIQDDFSPYVKSDSSISSSMDLLASI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00516 197 Gene3D - 82 137 - -
Pste5g00516 197 Pfam bZIP transcription factor 84 133 IPR004827 GO:0003700|GO:0006355
Pste5g00516 197 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Pste5g00516 197 MobiDBLite consensus disorder prediction 58 76 - -
Pste5g00516 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 166 IPR044521 -
Pste5g00516 197 Coils Coil 135 155 - -
Pste5g00516 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Pste5g00516 197 MobiDBLite consensus disorder prediction 58 101 - -
Pste5g00516 197 FunFam BZIP transcription factor 82 133 - -
Pste5g00516 197 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Pste5g00516 197 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Pste5g00516 197 MobiDBLite consensus disorder prediction 77 101 - -
Pste5g00516 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00516 Pste-Chr5 3402478 3403071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00516 18 179 bZIP Transcription Factor Family AT3G30530 57.576 5.53e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g00516 bZIP_1 7.3e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00516 5 3402478 3403071 Pste5g00516 5 3402478 3403071 ECH
Pste9g00306 9 1439517 1440131 Pste5g00516 5 3402478 3403071 PCT