Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00500 ATGGCCTACGCTCTACTATCATTGCACCACCGGCAAGCTTGCTTGAACAAGTCTGATGCACCGCCATCGGAATATACAAAAACCCTAAAGGCATCTCACAGCGCTATCCCAATATCGATTCGTAATCGAACCCTTCCAAAGGCAAACCCTCCAACGACCTCGTTTTCCTTTTGTATGTTTAAGCACAATGCTAGGGGAATATTGACAATGGCCAACAGTGAGCCCAATACTAATGGAATCCAATTCTTCATTACTTATGCAAAGCAGCTTCGTTTAAATTGCCTATACGCTGTGTTTGGAAGAGTAATCCATGGATTTGAAGTTCTTGATCTCATGGAAAAGACACAAACAGGTGCAGGGGACCGACTACGTTTAATAATTGCACCCGCCATCGCTCCACCACGGCTTTTGCTCCATCCTGTGGCTCTACTATCGTCGCTCTGCAACCACTGTGAGCCCACCGAAGTATTCATGACACTCAACGATCTATTGGTTTGGTTTTCTGAAACTATTAGATTAGATTATTCTGGCATGCGCTTTGCTGAGACTATGTTCGTTCTTCTTCCATTAATTTTGTTTAGAGCCTCATAA 591 0.4382 MAYALLSLHHRQACLNKSDAPPSEYTKTLKASHSAIPISIRNRTLPKANPPTTSFSFCMFKHNARGILTMANSEPNTNGIQFFITYAKQLRLNCLYAVFGRVIHGFEVLDLMEKTQTGAGDRLRLIIAPAIAPPRLLLHPVALLSSLCNHCEPTEVFMTLNDLLVWFSETIRLDYSGMRFAETMFVLLPLILFRAS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00500 196 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 42 119 IPR002130 GO:0000413|GO:0003755
Pste5g00500 196 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 39 122 IPR002130 GO:0000413|GO:0003755
Pste5g00500 196 Gene3D - 24 129 IPR029000 -
Pste5g00500 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 60 122 IPR044666 -
Pste5g00500 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 IPR002130 GO:0000413|GO:0003755
Pste5g00500 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Pste5g00500 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Pste5g00500 196 SUPERFAMILY Cyclophilin-like 58 123 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00500 Pste-Chr5 3255690 3256766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00500 62 134 U-box Gene Family AT5G67530 38.961 3.23e-11 59.7