Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00497 ATGTATCAATATAGTCCCCAGATGTACGGAACTGAATGGGACTCCTACATAGGAATTAGCAACCTAGCCAAGGTTGTTGGATCAGAACAGCTGAATGTTGTTGAGCCCACAAAATCACCCCTCAACATTGTAACCTCTCCTCTTCCAACTCCACCAGGTTTTTGTGCAAGTGCAACCAAAAGCCACGTGAGCTTTGAACCTCAGCAGCATGATAATCAGCACCAGATTGAGATTCCAACTACTTGGTGCTTTGAGTTTCCAAAGACAACAACAGATTCGCACAATATTCCTCGCCTAGCCTCTGGAGACAACTTCACCACCAAACAAGATCGACCATCCTCTCAATTCACAACCTCCTTTTGCCCGGTTGCTGAATCTTTCTTGTCTAGTAGTAATGGTGAAGATTGTCGTTCTTCATCTGAAAAATTTTGTAAATTTCCTTCTTATTCCGAAAAATACAGTGATATTCAGCCTGCCAGTATGCCTTATTACGATCATTTTTCACAAGAAGATGATAAATTACTGAGGGATGATGCTGCTACAGAAGAAAGGCCCCTTGAAATTTCCTTTCAGACAAACCAGTTAAAGCAGACTCCTCATAGACTTTGTGGGGTTGCCGCTGTGGCTTGTGGCAACTCTGGTTGTAGAAGAGGCAAAAAAAGAATAAGATGGACTAAAGATCTGCACGAGCCATTTATGATGATTGTTAATAGCCTTGGTGGTCCCGAAAAGGCAAAGCCTAAGGCTATACTACAGATGATGAAATCGGATCTGTTGTCCATTTCTCATGTTAAAAGTCATTTGCAGGTAAAACTATTTCAAGAACAATTGCTTTGTCGTTCCTAAACTTCATCTTGCATAGCTGCCACTTTCACACCTAATGGTCTCTGAGTCTCTC 898 0.4187 MYQYSPQMYGTEWDSYIGISNLAKVVGSEQLNVVEPTKSPLNIVTSPLPTPPGFCASATKSHVSFEPQQHDNQHQIEIPTTWCFEFPKTTTDSHNIPRLASGDNFTTKQDRPSSQFTTSFCPVAESFLSSSNGEDCRSSSEKFCKFPSYSEKYSDIQPASMPYYDHFSQEDDKLLRDDAATEERPLEISFQTNQLKQTPHRLCGVAAVACGNSGCRRGKKRIRWTKDLHEPFMMIVNSLGGPEKAKPKAILQMMKSDLLSISHVKSHLQVKLFQEQLLCRS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00497 281 SUPERFAMILY Homeodomain-like 218 270 IPR009057 -
Pste5g00497 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 219 270 IPR006447 GO:0003677
Pste5g00497 281 Gene3D - 218 273 - -
Pste5g00497 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 213 269 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00497 Pste-Chr5 3239342 3240430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00497 204 269 G2-like Transcription Factor Family AT5G06800 59.091 2.49e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste5g00497 None None None