Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00494 ATGAGTCCGGACATGGTTGTGGTAGCCACCATGTTCCCCTTTGGAAAACTCAAACTCAAATTCAAATTCAAATTCAACAGCCTTAAACCCTGGCAAAACCCTAGATTCCTGAGCAGCAAGAGACCCGCCGAATCCGCCACCAAAATCATCGGAAAAACCACCCTGAAAGCAGCCCAAGCGGCTTTGCTGGAGTACCTCCACTCGACGCGGAGCCTCCCCTTCCTAGACGCCGACAACATGTGCAGAAACTCCCCGTCCTTCCTCCACGACCTCCTCGCCAAAACCCAAGCCCAAGCCCAAGCCCAAGCCCGCCACGTGGACGACACGAAGCGGTCCATCTCCCGCTACCTCCGCTACCACCCCATCAACGAGTTCGAGCCCTTCTTCGAGAGCGCCGGCCTCACCCCTCCCCAGTACGCCCCCCTTCTCCCTCGTCACATGATTTATCTCAACGACGACGCTTTGCTCATGGCCAATTACCACACTCTCTGCAACTACGGCGTCCCACGCACCCAGATGGGCCGGGTTTTCACTCTCGCCCCTCAGCTGTTTCGGTATAAGCCCGGGGTTTTGATCTCCAAGATTCGGGATTACGAAAACCTCGGTCTTTCACCCAATGCATTGGTGCGTGTCGTTGCTTCTAGCCCCGCCATTTTGGTTGGGCCTGTTGATTTTCATTTTGTTAAGGTTGTGGAGACCTTGAAGGGTATTTCTGGAAACGATGCTGATTGGATTGGACAACATTTGTTGTGTAACCAGGGTTGTTGTAATTGGAGGATAGTGCTTCATGTTTTGTGTTTGTTTTCCAGTGTTTACAGCGAGGAACAGTTGGGTGATTTAATCACTCGTCGCCCTTGTTTACTCTTTCAGGAGTCTGGAGCTAGTGTGTTAGCCCTGATTAACTTCTTGTTCAAATTTGGATTGTCTATGAACCAGGTTTCTCTCATGCTTCTCCAGTTTCCGCAGATTCGGGTTGCGGATTTTTTGTCCAACTTGAGGCAGTGTTTTCTGTTCTTGACTGAGATTGAGATGGAGGCTTCTGATATTTGGAAGATTTTGCAGTCTCATTACTTGGTGTTGGGTTCCTTTGCTTTGAAGAAAACTATTACTTTGCTTACTAACTTAAATGTTGGCAAGAAACGGCTGTGTAGAATTGTGAGAGATGATCCTCTAATAATGAAGAGTTGGGCTTTGGGGAAGAGGATTGAGCCTTTGACGAACTCGAAATTGGAGTATGAATCAAAGGCACTGAAGAAGAAGTTCATGCTGAAGTTGGGGTATGTGGAGAACTCAAAAAAAATGAATGATACGCTTAGGCTGTTCAGAGGTAAAGGAGCTGAGCTTCAGGAGAGACTTGATTTTATTGTTAACGCTGGGTTGGATTATGAGGTTGTCTGTAAGATGATTCGAGATTCCCCGCGGATTCTTAATCAGACCACGGGTAGGATCAACATAAAAATTGAGTGTCTTGTGAACGAAGGATATTCTATATCAGATTTAGTGAGTTTCCCTTCCTTTCTTTCCTATTCACCTCGTAGGGTTAAGCTGAGGTTTTCTATGTATAATTGGCTCAAAGAGCATGGAGCTGCTGAACCGGGGCTTGCTTTGAGCACTATAATTGCATGTTCCGAAAAAACATTTGAGAAGATGGCTTTTTTATTTTCAAAATCACCATCTTTGCCTATGTTGCTGTGCACTTGCCCCAGCTACATTGCAGATCACTTTCCTAGTGTTTGTTTTTCTAGTCTAACTATATCTGTTCCTCATCTCCAGTGTGAACCACACAGCAAATGGAATGAAACTGAAGAGCATGAGATACTGTATTTATTTACAATTGAAAATTAG 1845 0.4596 MSPDMVVVATMFPFGKLKLKFKFKFNSLKPWQNPRFLSSKRPAESATKIIGKTTLKAAQAALLEYLHSTRSLPFLDADNMCRNSPSFLHDLLAKTQAQAQAQARHVDDTKRSISRYLRYHPINEFEPFFESAGLTPPQYAPLLPRHMIYLNDDALLMANYHTLCNYGVPRTQMGRVFTLAPQLFRYKPGVLISKIRDYENLGLSPNALVRVVASSPAILVGPVDFHFVKVVETLKGISGNDADWIGQHLLCNQGCCNWRIVLHVLCLFSSVYSEEQLGDLITRRPCLLFQESGASVLALINFLFKFGLSMNQVSLMLLQFPQIRVADFLSNLRQCFLFLTEIEMEASDIWKILQSHYLVLGSFALKKTITLLTNLNVGKKRLCRIVRDDPLIMKSWALGKRIEPLTNSKLEYESKALKKKFMLKLGYVENSKKMNDTLRLFRGKGAELQERLDFIVNAGLDYEVVCKMIRDSPRILNQTTGRINIKIECLVNEGYSISDLVSFPSFLSYSPRRVKLRFSMYNWLKEHGAAEPGLALSTIIACSEKTFEKMAFLFSKSPSLPMLLCTCPSYIADHFPSVCFSSLTISVPHLQCEPHSKWNETEEHEILYLFTIEN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00494 614 PANTHER CGI-12 PROTEIN-RELATED 261 550 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 Gene3D Transcription termination factor 3, mitochondrial 89 257 IPR038538 -
Pste5g00494 614 Gene3D Transcription termination factor 3, mitochondrial 297 556 IPR038538 -
Pste5g00494 614 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 SMART mt_12 497 530 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 SMART mt_12 466 496 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 SMART mt_12 314 345 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 FunFam Transcription termination factor MTEF18, mitochondrial 299 561 - -
Pste5g00494 614 Pfam mTERF 273 404 IPR003690 GO:0003690|GO:0006355
Pste5g00494 614 Pfam mTERF 437 548 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00494 Pste-Chr5 3219217 3221620 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste5g00494 mTERF 1.7e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00494 5 3219217 3221620 Pste5g00494 5 3219217 3221620 ECH