Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00481 ATGAGTCTCCAAAGCAACCTCCTCTCTCTTTTGGTTCCCCTGGCCGCAGTTTTGGCATCTTTGTATCTCATAAATCCAACTCCACAGGTTTTCAACAACTTCACATATTTCAGTCTCACAACCTTGTCACCATCATCGTCTGCATACTTGGCAAAACCTTTAACTTGGAACTTTTGGAGAGACCATCATCATCGACCACACAAGAAGCACCCTGATAGCGGGAATACTGATTCCATTTGTGATGATTTTCCACCAGGAATTCCACCTCCAAATACCAATACCACTTCTTATCTTTGTGTTGATCGAAAGGGGTGTTGTAATTTCACAACAGTACAAGCCGCCGTGAATGCAGTTCCAGATTTTAGTGTACAAAGAACCATAATATGGATAAACAATGGCATATACTATGAGAAGGTCTTGGTGCCGAAAAGCAAAGCCAACATTACATTTCAAGGACAAGGCTACACTTCTACTGCAATTGCATGGAATGATACTGCGTTGTCCGCGAATGGAACATTTTATAGTGGCTCTGTACAAGTTTTCGCCTCCAACTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCTCCAATACCAAGTCCTGGGGCAGTAGGGGCACAAGCAGTAGCTATTAGAGTTTCAGGAGATCAATCTGAATTTAGGGGTTGCGGATTCTTCGGAGCCCAAGACACCCTTCACGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGCTCCATTGATTTCATATTCGGCAATGCAAGGTCACTCTATGAGAATTGTGAAATAGTTTCTATAGCGAACCCGGTACCAGTGGGACAAAAGAGCATAAATGGTGCTGTTACAGCCCATGGTAGAGTTTCAGGGGATGAAAATACAGGATTTGCATTTGTGAACAGTACAATAGGAGGAAATGGAAGAATATGGTTGGGTAGAGCATGGAGACCTTATTCTCGTGTTGTGTTTGCCTTCACCGTAATGTCAGATATTATTGCCCCTGAAGGTTGGAATGATTTCAACGACCCTTCAAGAGATCAGACTATATTTTATGGAGAATACAATTGCTCAGGGCCGGGGGCTAATACCAACTCGAGAGCACCCTATATCCAGAAATTAAATGAAACACAAGCTTTGGGATTCCTCAACACAAGTTTTATTGATGGCGACCAATGGTTAGAAACTTCCAATTAAGATACCCTTCCCATACCCCACCCCATTCCCTATTGCTAATTTTTCCCACTCATATAATAAACGGGAAGTAAGTATATCCACACAAATTAAGCAAAGCATAGATCATAGACATATTTCATTGAATTGTGTATACTTTAA 1338 0.4126 MSLQSNLLSLLVPLAAVLASLYLINPTPQVFNNFTYFSLTTLSPSSSAYLAKPLTWNFWRDHHHRPHKKHPDSGNTDSICDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQAAVNAVPDFSVQRTIIWINNGIYYEKVLVPKSKANITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPIPSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCEIVSIANPVPVGQKSINGAVTAHGRVSGDENTGFAFVNSTIGGNGRIWLGRAWRPYSRVVFAFTVMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGANTNSRAPYIQKLNETQALGFLNTSFIDGDQWLETSN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00481 399 ProSitePatterns Pectinesterase signature 2. 246 255 IPR033131 -
Pste5g00481 399 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 86 396 - -
Pste5g00481 399 Pfam Pectinesterase 100 392 IPR000070 GO:0030599|GO:0042545
Pste5g00481 399 Gene3D - 91 399 IPR012334 -
Pste5g00481 399 MobiDBLite consensus disorder prediction 65 85 - -
Pste5g00481 399 SUPERFAMILY Pectin lyase-like 97 396 IPR011050 -
Pste5g00481 399 FunFam Pectinesterase 92 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00481 Pste-Chr5 3147654 3149746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00481 69 399 Carbohydrate Esterase AT1G05310 72.810 0.0 525