Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00473 AACTTTTACCTGTGGAGTACTGAGGCTTCCATTCTTTTGCACAAGTTCTACTATACATGCAAATACCTTTCCTGTCTGCACATATTGCTCAAGGTTGCATTTTTAGTTCATTGGTGAGTTTTGGAGATCTAGCTATGCTGCATTTTTGGCCTTGACATTCGCTTCTCCAGTGACGAATTTGGGTCATAATGCTTAAAGATGCTCGATTTGCAGAAAGGTTTTGTTTCATGGGCTAGGTTGCTTTCCCCCATTAAATTTTCTTTTCTATCAGGTGTAGTACCCTACAAAAGTATTAGCTCTCTTGAAAGTAGTTTGTGGGTATGACTTTTTGCTCGTTGCCAAAGTTAAATTTGTTTTTCGTTATTTTTAAGGAATTGGGTTTTGGTGGTTGTGCTGTTTTTTCTCTGAAGAAATTTGAGCATTGCTTGTGGAAGGATTGATCTGAAAACTTAAGTTGATGCTTGATCTGTAGTGTTGTGATGAGCTTGTTTCTAGGAAAAGATTGGAAATTGAAGTGTTAGTGGTTTTGGAAAGTATCAAAGTAGAGTCGATGGAAGTATTTAACTAGTACATTTTGTTCTTGAAGATTTGTGTAGTGATGGCCTCAACAAACCCTTCTCCAAATGCTTCCCCTGTTGCAGTGCCTCCAGCACTTGGTGGTGTTTTATCACCTCCTCCTTCTTCAACTAAATCTTCCACCCAACCATCACCTCCCAATTCTTCTCAGCCTAATCAAACACCCAATTCCCCTGGTCCTTCAGCTCCTCCTCCTCAGGTAGTGCCTATAACCCCTCCTCCTTCCATATCACTTTCTCCTCCACCATCATCTACACCACCTCCAACATTGCCCCCTCCTTCACCACCACCATTACCACCAGCATCTCCAACTCCTCCAGTTGCAACATCTCCACCTGAGACTCCACCAAATGGCTCCCCTCCTCCTCAATCATCTCCCACAATAACTCCACCTTCCCCTCGACTGATTTCACCATCTCCTCCTCCTCCAACCAATGTTCCAAGCCCACCATTCTCCACTTCTCCTCCCCATAAGGAGAATCCACCAAAAAGTAGTCCTTCACATGCATCCCCTCCACCAGTTCCTCACTCTCCTCCTTCTATTTCCTCTGATGTTCCCCCTCCATCCACATTGCCATCAACTCCTCCTTCAGTCCCTTTAGGATCTTCACCTCCAGCTTCTTTGCCTGACTCCTCAACTAATAAAACCACCGCTGAAGCTCCAACAGTGTCGCTACCCTCTCTTCCAACAGAGAAGCCCACTGCTAGACCAACTAATGATGGTACTAACAATATGGCTACAAATGAAACATCTTCACATTCAGGAGGGTTGAGTCCTGGAGGATCTGTGGCTATTGGAGTTGTAGTTGGTTTTATTGCTCTTAGCCTTCTAGTTATGGTCGTGTGGTTTGTACAGAAGAAAAGGAAGAAGGATACAGGATCAAAAGGTGGTTATGCTGCTCCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTCTTGAGGCCACAGTCTCCAGCCAACTTTGTAGGTAGTGGCTCTGGTAGTGATTTTGTGTATTCACCATCAGAGCCAGGTGGAGTAAGTAGTTCAAGATCATGGTTCACATATGAAGAACTTATCCAAGCTACAAATGGGTTTTCAGCACAAAAATTGTTGGGAGAAGGTGGATTTGGTTGTGTCTATAAAGGATTGCTCATAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAACGTGAATTCAGGGCAGAAGTTGAGATTATTAGTCGTGTACATCATCGACATCTAGTTTCCTTGGTTGGTTACTGTATATCTGAGCATCAAAGATTACTTGTATATGATTATGTTCCCAACAATACTCTTCATTACCATCTCCATGGTCATCCTCGCATTATTCATCGAGATATTAAGTCATCAAACATCCTGCTTGATCTCAACTATGAAGCTCGAGTTTCAGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACGTGTAATGGGAACTTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAACTTACTGAAAAGTCTGATGTATACTCTTTTGGGGTAGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCATCTCAACCAATTGGTGATGAGAGTGTGGTTGAATGGGCTCGACCTCTATTGACAGAAGCACTTGATAACGAGGAGTTTGAAATGTTGGTGGATCCAAGATTAGGAAAGAAGTATGATAGACATGAAATGTTTAGGATGATGGAGGCTGCAGCAGCTTGTGTACGCCACTCATCGGTGAAGAGACCACGCATGAGTCAGGTGGTGAGAGCTTTAAATTCATTGGATGAGTTGTGGGATCTGAACAATGGAATGAAACCGGGGCAGAGTTCGGTGTTTGACTCAGCACAACAATCTGCACAAATCAGAATGTTTAGGAGAATGGCTTTTGGGAGTCAGAATAGTTCCACTTTCTTCAATGAATCCACCAACTTCTCCCAACATCAATAATCAATCTGTTCTGAGCCTTGAAACGTTTAGGGGATTGCTCACAACACCTACCAATCTGCTTCTCTAAATCTCTCATTTTTCTTCTCATTCTCCTAACATCATTTTGCTTGCTATGCCTTTTATATTCTTTGTAAATTACGTTATTTGTTACGTAATGCATGTATAACACTATGCATCAGCTGTCATCCATCTAGATTCAACACCCCCCAATATCACAATTTGTCGTCCTTACACCTTCATCGGTTGAGATTGAATTGCTGAATCCGATAATCCAACTGAATCAATTAAGTTGATTCTGATTTTCTTTTTTCCATTTAGCTTATGCATTTTCGGATTTTAGAAGTTAAATCAAA 2919 0.4214 MASTNPSPNASPVAVPPALGGVLSPPPSSTKSSTQPSPPNSSQPNQTPNSPGPSAPPPQVVPITPPPSISLSPPPSSTPPPTLPPPSPPPLPPASPTPPVATSPPETPPNGSPPPQSSPTITPPSPRLISPSPPPPTNVPSPPFSTSPPHKENPPKSSPSHASPPPVPHSPPSISSDVPPPSTLPSTPPSVPLGSSPPASLPDSSTNKTTAEAPTVSLPSLPTEKPTARPTNDGTNNMATNETSSHSGGLSPGGSVAIGVVVGFIALSLLVMVVWFVQKKRKKDTGSKGGYAAPSPFTSSHNSGTLFLRPQSPANFVGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQKLLGEGGFGCVYKGLLIDGREVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGHPRIIHRDIKSSNILLDLNYEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESVVEWARPLLTEALDNEEFEMLVDPRLGKKYDRHEMFRMMEAAAACVRHSSVKRPRMSQVVRALNSLDELWDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQNSSTFFNESTNFSQHQ 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00473 655 MobiDBLite consensus disorder prediction 1 251 - -
Pste5g00473 655 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 442 638 IPR047117 -
Pste5g00473 655 MobiDBLite consensus disorder prediction 197 251 - -
Pste5g00473 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Pste5g00473 655 FunFam proline-rich receptor-like protein kinase PERK8 432 613 - -
Pste5g00473 655 SUPERFAMILY Protein kinase-like (PK-like) 337 605 IPR011009 -
Pste5g00473 655 ProSiteProfiles Protein kinase domain profile. 354 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00473 655 Pfam Protein kinase domain 438 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00473 655 FunFam Proline-rich receptor-like protein kinase PERK8 326 429 - -
Pste5g00473 655 Gene3D Phosphorylase Kinase; domain 1 331 429 - -
Pste5g00473 655 MobiDBLite consensus disorder prediction 41 196 - -
Pste5g00473 655 SMART serkin_6 354 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00473 655 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Pste5g00473 655 MobiDBLite consensus disorder prediction 25 40 - -
Pste5g00473 655 Gene3D Transferase(Phosphotransferase) domain 1 433 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00473 Pste-Chr5 3091823 3097886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00473 226 594 Trihelix Transcription Factor Family AT1G68690 57.683 5.45e-160 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pste5g00473 Pkinase 1.2e-23 CL0016