Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00455 TTTCAATTCAAAATTGGTTTTCTCTACGCAAAAACAAACAGAACAACAAAGCAGGTTTTGATGCTCTTCTGTGGTTTTGAGAGAGAGGTTTTTGAAGTTGAAGAGCATGTCCTAAGAGGATCCCTTTATCTGAAAAAGATTTTGGTTTGCAGAAAGAAAGTAATATATTGAGAGAGAGGAGAGAGAAAGAGGTGTAATAGAGAAAGAGTCTAGCTTTTTGTTTGTTTGTAACTTTGCATTGAATTCAATTTTCTTTCTCTCTCTTTTGCTTACTCGCTACAAGCTATTCCACTATAACCGACTCCCTCTTTTACCGTGGAAGAAGGAAATGATCTCAAGTGGAAGGCGGTTTCGCCATTGATGGGGTTTACCAGAGCTGCTTTAAGAGAAACCATAAAGTAACAACACTTTTAGGTTCTTCTCTTGTCATGGCTTCCAAGGCCACCAACCCAACAACAACTACTCAACTCGAACCACTCCCACCACCTCATCCTCATCAGTTACAACAACAACACCATCATCATCAAATTTCTTTTGGAATGATGCAATCCTCTTCCTCCTCTTCCTCTATCCAAGGAAATTACCTCACAAGCAAGGATTCCGGGGCTTATGACTTGGGTGAATTGGATCAAGCCTTTTTCCTCTATCTTGATGGACAACCAGACCCCTCGAGTGTTCAAGACCAAAGACACAACTCATCATCAGGAATGAGGCCTCCAACTCTCAACATTTTCCCGTCGAAGCCTATGCATGTAGAGCCATCATCATCCAAGTCCAAGGTTGACATAGAGCTAGTTTCTCCGCAAACAAGTGGATCAAAGAGACCATCAGAGCCGTCCATGGAGTTGGCCAACCCTCGAAACGAAGCTGGTTCTGCCCCTCAACCACCCAAAGCTGTCAAGCGAGAGAGCAACCGCAAAGGACCAACGTCAAGTTCTGAACAGGAAGGACCAAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAACTAGAGTCCAGTAGGATTAGGCTTAATCAGCTGGAACAAGAGCTACAACGTGCTAGAACTCAGGGCATATTCTTCGGTGGGAATGCACTTTTGGGAGGAGAGCAAGGCCTTCCTGTCGCTATGAATACCATTAGCTCAGAGGCTGCAATGTTTGATGTAGAATATGCTAGATGGCTAGAGGAGCACCACCGCATAGTGTGTGAGCTTAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTAGACTGTTTGTGGACAATTGCTTGGCGCATTATGACCAAGTAATGAACCTCAAGAGCTTAGTGGCCAAAACAGATGTATTCCATCTTGTTTCTGGCCTGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAAGCCATCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCTACGCAAGAGGCAGAAGAGGCTCTCTCCCAAGGGCTCGAGGCTCTCAATCAATCTCTCTCAAACACTATAACATCTGATTCTCTGAGCTATCCTCCCAATATGGCTAACTATATGGGACAGATGGCTGTGGCCATGAACAAGCTCTCCACTCTTGAAGGTTTCGTGAGACAGGCGGATAGTCTTCGGCAGCAAACAATTCACCGACTGCATCAGATCCTAACAACGCGTCAAGCTGCAAGGTGTTTTCTAGCCATAGCTGAGTACTTCCATCGTCTGCGAGCGCTGAGTTCATTGTGGTTGGCACGTCCTCGCCCAGAATAGCTAGATTGATGATAGTGGTGCTGGTGCATGCGTGGTAGTGTCAAATCCGCTAGCTAGCTACCTATATACATACATATGCCCTTAATTTGTACCTTCTTAAATTATAAATTAAATGTTCTCTCTCTGGTACCACCCTTCCTGTTTCTCACTGCATCCATCAGCTGTGTAGATAGACAGATAATTAATATAGAATTAAATGTTAACAACTATATATACTTCTCCTTTCCTAAGGTTTATAAATAGGAAGTCATTTTTGTGAAAGAAGAGGGCATGGATCATGG 2128 0.4389 MASKATNPTTTTQLEPLPPPHPHQLQQQHHHHQISFGMMQSSSSSSSIQGNYLTSKDSGAYDLGELDQAFFLYLDGQPDPSSVQDQRHNSSSGMRPPTLNIFPSKPMHVEPSSSKSKVDIELVSPQTSGSKRPSEPSMELANPRNEAGSAPQPPKAVKRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARTQGIFFGGNALLGGEQGLPVAMNTISSEAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGLWKTPAERCFMWIGGFKPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSNTITSDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADSLRQQTIHRLHQILTTRQAARCFLAIAEYFHRLRALSSLWLARPRPE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00455 472 ProSiteProfiles DOG1 domain profile. 254 468 IPR025422 GO:0006351|GO:0043565
Pste5g00455 472 PANTHER TRANSCRIPTION FACTOR TGA9 90 470 - -
Pste5g00455 472 SUPERFAMILY Leucine zipper domain 181 223 IPR046347 GO:0003700|GO:0006355
Pste5g00455 472 Pfam Seed dormancy control 272 346 IPR025422 GO:0006351|GO:0043565
Pste5g00455 472 Gene3D - 180 229 - -
Pste5g00455 472 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Pste5g00455 472 MobiDBLite consensus disorder prediction 1 32 - -
Pste5g00455 472 Pfam bZIP transcription factor 181 214 IPR004827 GO:0003700|GO:0006355
Pste5g00455 472 SMART brlzneu 177 250 IPR004827 GO:0003700|GO:0006355
Pste5g00455 472 MobiDBLite consensus disorder prediction 77 184 - -
Pste5g00455 472 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 223 IPR004827 GO:0003700|GO:0006355
Pste5g00455 472 CDD bZIP_HBP1b-like 181 233 - -
Pste5g00455 472 MobiDBLite consensus disorder prediction 79 98 - -
Pste5g00455 472 FunFam BZIP family transcription factor 180 229 - -
Pste5g00455 472 Coils Coil 200 227 - -
Pste5g00455 472 MobiDBLite consensus disorder prediction 107 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00455 Pste-Chr5 2967463 2974521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00455 50 470 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 65.158 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g00455 DOG1 3.1e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00455 5 2967463 2974521 Pste4g02957 4 21056041 21064137 PCT