Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00442 CAAAAACCCTTCTCCCTCTCTTGTTCCCTCTCTCCCTCTCTTCATTCTTACGGAGAGAGAGAGAAACGTAATAAACCTAAACCCTCTCTTTTCTTAACGCCGTAACGGGCATACCCAAAGGCACCGTCACAAGTGCCCCCACGTGCGAGTCACGTGCTTTTGGGAAATCTCTTTCCCATGGCTGTGGACCAGCCCTCGAATCCCAACTCCGTTGACAGCGGAGGTAACGGCGCCACGCCGTGCTCCATCGCGGACGGCGGAGAAGACGGGAGGCCGGCGGCGAGGCTGCCTCGGTGGACACGCCAGGAGATTCTGGTGCTGATTCAAGGAAAGAGCGACGCGGAGAGCCGGTTCAGACCGGGTCGGGGGAGCGGTTCGGCGTTCGGTTCGAGCGAGCCGAAATGGGCGCTGGTATCGGCCTACTGCAAGAAGCACGGCGTTAACCGGGAACCGGTGCAGTGCCGGAAGCGGTGGAGCAACCTCGCTGGCGATTACAAAAAGATCAAGGAGTGGGAGTCGCAGGTCAGGGACGAAACGGAGTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAGTTGCCTGGGTATTTTGACAGGGAAGTGTACAATATTCTCGATTCGCCGTCCTCCACGGCTGCGGCTGAGACCCCTACCCCGACGCCGGTGGCGGAGATGCCGGCCGATGAAGAGCTCCACCTTTATGATAGTAATCGCAGGGTTGGCAGTGAGGATGGCTTGTTCTCTGATTGTGAGAAGGACGAGCTTTTGCTTTTAGCTTCTTCCAAGGATGTTCCTGCACCTGTTCCTATCTCAGAGAAGCAATATCAACCGCCCTTCCAAGGCTGCGAGGGGGAGGACAATGCTCAAGGTACCACCAATGAAAAACGGCCTGCCCCAAATCCAGAAATGGGTTCTACATCTCAAGGTGAACGAAAGAGGAAGCGGTTTGCAACTGATGGAGAGGAGGAATCTTTGCAAAACCAATTAATTGATGTCCTAGAAAAGAATGGCAAAATGCTACGTGATCAACTTGAAGTTCAGAATATGAATTTCCAGTTGGATCGCCAACAGCAGAAAGACACTGCAAGTAATATAGTTTCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTATAGAGATCGGAATAGAATAGTGTACATAACAATTGAAGTCAACAGTAGTGATTCCCATAATTTATCTCGGTATAGTTTCTAGAAGATGAATGTCACACTAGTTACCCTTTTTTACTTTATCTCCAGCCTTTGCACAATGTCACTTTTTTTTTTTGTGGTTGATTACTGCCACTACAGCATTTTATACACAAATTTGGAGGTTACTGCATTTATTTATTCTCTTCTTTCAGTGAGTTATATGAATCTTTCCCCGTCAATAATAGCGGTTGTACAGATGATATTACTCTTACC 1446 0.4917 MAVDQPSNPNSVDSGGNGATPCSIADGGEDGRPAARLPRWTRQEILVLIQGKSDAESRFRPGRGSGSAFGSSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAETPTPTPVAEMPADEELHLYDSNRRVGSEDGLFSDCEKDELLLLASSKDVPAPVPISEKQYQPPFQGCEGEDNAQGTTNEKRPAPNPEMGSTSQGERKRKRFATDGEEESLQNQLIDVLEKNGKMLRDQLEVQNMNFQLDRQQQKDTASNIVSVLDKLADALGRIADKL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00442 326 MobiDBLite consensus disorder prediction 1 37 - -
Pste5g00442 326 ProSiteProfiles Myb-like domain profile. 32 103 IPR001005 -
Pste5g00442 326 MobiDBLite consensus disorder prediction 210 268 - -
Pste5g00442 326 MobiDBLite consensus disorder prediction 228 249 - -
Pste5g00442 326 CDD GT1 38 110 - -
Pste5g00442 326 MobiDBLite consensus disorder prediction 250 264 - -
Pste5g00442 326 MobiDBLite consensus disorder prediction 53 72 - -
Pste5g00442 326 MobiDBLite consensus disorder prediction 150 172 - -
Pste5g00442 326 Gene3D - 40 108 - -
Pste5g00442 326 MobiDBLite consensus disorder prediction 1 18 - -
Pste5g00442 326 Pfam Myb/SANT-like DNA-binding domain 39 126 IPR044822 -
Pste5g00442 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 5 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00442 Pste-Chr5 2912224 2915892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00442 39 111 Trihelix Transcription Factor Family AT1G33240 34.247 9.75e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste5g00442 Myb_DNA-bind_4 1.6e-12 CL0123