Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00438 TTCAAGTTTCCAACCACTCAGCTTCCCAGAATCAACTGCCATTACTCCTCTTTCGAAGTTAGAGATATTAGCTATCAACCCCCGGGGACTCAGTTGAAACTTCTAAATTCTGTTAGTTTTTCACTTCCAGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGAAAAACTACTCTGTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCAGGATCCATTTACATCCAAAAGTATGGGAATGATGGAAATCCTAGTCAACCTCCAGAGCCCTTGGTGCCAGAAAGAGTTGCAAAGAAGTCTCGAGTTGAAGGGTTGGAGTGTAGTGTCCAAGAGTTCCGAGAAGAGAGTCAATTGCAACTGAACGAGATTAAACAATTACTTAAGGAGAGAGGTAGAACATGTAACCAAGCTGATAGTGTGGTTGATGAAGTTACTTTTGGGTGGCCAAGGCAAAAGGGTAACCATCAATTGAGGGAGAATCTTGCTCTAGGGCTACAGAGGGCAATTAACTGGGTTGGATTGAGTGGGATATCGTTGGATAAAAATCCTCATTCCCTTAGTGGTGGTTACAAACGTCGTCTAGCCTTGGCAATACAATTAGTGCAAATTCCTGATCTATTAATATTGGATGAACCTCTTGCTGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTCTGAAGCATCTGAAAAAAGAATTAACTGTGCTAGTTGTTAGCCATGATTTGAGAGAGTTCGCAAGTCTAGTCGATCGATCATGGAGAATGGAAATGGGTGGCAACCTTAGAGAGGAATTTCTACCATTA 819 0.4212 FKFPTTQLPRINCHYSSFEVRDISYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGNDGNPSQPPEPLVPERVAKKSRVEGLECSVQEFREESQLQLNEIKQLLKERGRTCNQADSVVDEVTFGWPRQKGNHQLRENLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00438 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 263 IPR027417 -
Pste5g00438 273 CDD ABC_cobalt_CbiO_domain1 19 263 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pste5g00438 273 SMART AAA_5 44 264 IPR003593 GO:0016887
Pste5g00438 273 Coils Coil 112 132 - -
Pste5g00438 273 Gene3D - 11 270 IPR027417 -
Pste5g00438 273 PANTHER HEAVY METAL TRANSPORTER 19 270 - -
Pste5g00438 273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 271 IPR003439 GO:0005524
Pste5g00438 273 Pfam ABC transporter 35 216 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00438 Pste-Chr5 2877704 2887496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00438 22 247 Calmodulin-binding Proteins AT2G36910 26.872 5.78e-08 52.0