Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00436 ATGTTTAGTAAAAGGCACACCCTTTCTTCTCTTGCAAGGGAATTGTTGGCACTTCAGCCACTTTTTCTTATCTTCTTGTTCAGTTTGCAACACAACACTGTGCAGTGTCAAGGAAGGTTGAGCAAACATGTTTCTTCAGAGCCTCCCTCACCTTCTAGGCTATCACCGTCATCATCAGGATACAGGGATGACACCAGGAAGATCATTTTGAGCATGGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTCAACCGTACACCAATCCTCAAAGGCCCTGTCATATTCTCCCCGAAAATTGCCCCTAAGACACTCCAATCAGCTTTGGCAAAGGAAAACCACTTGCTTGGTTCAGGTCCAAATGGGAAGTACTACAAAACTGTGCTTGACAATGGGCTCACTATTGCAGTCAAAAGGCTAACACCCTTTGAGAGCAATTCCCCCGAGACTAAGAGAAAATCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTGGCAAGCTTAAGACATAGAAACTTAATGAGTTTGAGGGCCTATGTTCGCGAGCCTGATGGGTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCGGATGTGATGAATAGAGTAAGGGAGAATGAGTTACCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTTAAGGGTCTTCAGTGTCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTGCAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCAAGATTGGCAGATTATGGCTTGGCTAAAGTTCTGCCCAACTTGGATAGAGGATCTTCTCTCTACACCCCTCCTGAATTTTTCCATAGTTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAAGGATCCCACAGATCCTTTCTTTGGAGAAGCAGCCAGTGGGGGGAGTTTGGGATGTTGGTTGAGACATTTGCAGCAAGCTGGAGAGGCACATGAAGCCCTGGATAAGAGCATGTTAGGGGAAGAAGGGGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGTCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGAACCAAACCTTGATTCTTCAGTTTCTAGAGAATTTTTTCCCCTTATCCCCTTTTCTGTAATAAGATGGTAGGGGTCTTTGGTTGGTAGCCATGATTCTGGTGTAATTGATTGTTTTGCATGATCTTGGTTTTCATGGTGTGGTTTCTAATTTTTCCATGTTCTCTTTCTCTATTCTATTTCCTTTTCCTTTGGCTGATTTTGCAGGTGGTTATTGATTTAGGTCACACTAGTTACTAATATGTTATGTTTGTAAATGACTAGTCATGTTAACAGGAAATTTCTACTAGGCTGTAGCTGTATCTTAGAGGAACATGCCATGAATGTTACCATAAGCGTTTTCTCTGAGAATCTCAGTCT 1575 0.4337 MFSKRHTLSSLARELLALQPLFLIFLFSLQHNTVQCQGRLSKHVSSEPPSPSRLSPSSSGYRDDTRKIILSMVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSGPNGKYYKTVLDNGLTIAVKRLTPFESNSPETKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVMNRVRENELPFGWEVRLRIAVGVVKGLQCLHFTCVPQILHCNLKPTNVMLDAEFEPRLADYGLAKVLPNLDRGSSLYTPPEFFHSCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAHEALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00436 405 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 115 206 - -
Pste5g00436 405 SUPERFAMILY Protein kinase-like (PK-like) 126 399 IPR011009 -
Pste5g00436 405 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Pste5g00436 405 Gene3D Transferase(Phosphotransferase) domain 1 207 404 - -
Pste5g00436 405 CDD STKc_IRAK 129 402 - -
Pste5g00436 405 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 28 401 - -
Pste5g00436 405 Pfam Protein kinase domain 125 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00436 405 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 207 404 - -
Pste5g00436 405 MobiDBLite consensus disorder prediction 40 61 - -
Pste5g00436 405 ProSiteProfiles Protein kinase domain profile. 123 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00436 Pste-Chr5 2870586 2872822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00436 69 402 Receptor kinase-like Gene Family AT2G31880 34.648 1.77e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pste5g00436 Pkinase 7.7e-33 CL0016