Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00433 AGAAGCTGCAACTGAAAGTGAAAGAAAGGAAACAGAAACGAAGGGATGTGTTCTCTACTTTGGAGTTCCATTACAATGTGTGTAGCACTACTCCTTCACCTTGGCATTGTACACCCTTCACCCTCTCACCTTAGGATCACTCGCTTACCGGGTCAACCCAATGTTCAGTTTCATCAGTTTTCAGGTTATGTGACCGTTGATGACAAAACCAAGCGAGCCCTCTTCTTCTACTTTGCTGAAGCTGCCAAAGATGCAGTTTCCAAGCCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGACCCAAAGGTGAGGCCTTGGTTTGGAACCCATTCAGCTGGAACAGAGAGGCGAATATGCTGTATTTGGAAACGCCAATTGGAGTTGGATTCTCTTACTCAACTGATACTTCATCTTATGAGGGTGTGAATGACAAAGTTACAGGCAAGGATAACTTGGTGTTCTTGCAAAACTGGTTTATAAAGTTCCCAGAATACAGAAACAGAAGTTTGTTCATTGTAGGAGAAAGCTATGCTGGTCATTATGTTCCTCAACTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTATTCAACTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTCAATTCTAGAGCTGAGTTCTTCTGGTCACATGGATTAATTTCAGATTCAACGTACAAAATGTTCACTTCTGTTTGTAACTATTCAAGATATGTGAGGGAATACTATAATGGTGCTGTTTCCCCTATCTGTTCAAGTGTTATGAGCCAAGTCAGTACGGAAACAAGTAGATTTGTTGACAAATATGATGTGACCCTTGATGTATGTTTATCTTCAGTGTTTTCACAAACCAAAGTCCTCAATCCCCAGCAAGTCACTGAAACAATAGATGTATGTGTGGAAGATGAAACAGTCAATTATCTGAACAGGAAAGATGTGCAGTCATCTTTGCATGCACGTTTGGTTGGAGTTCAAAGATGGTCCGCTTGCAGCAATGTCCTGGATTACGACCTGCGTGACTTAGAGATACCAACAATCATGGTTGTGGGGAAGCTAGTGAAGGAGGGAATACCAGTTTTGGTTTACAGTGGTGATCAAGATTCAGTTATCCCACTGACTGGAAGTAGAACATTAGTACGTAAAATGGCAAAAGAACTGGGATTGAAGACCACTGTGCCATACAGGGTCTGGTTTCAGAAGCAACAGGTGGGAGGGTGGACTCAAGTTTATGGTAACATCCTTTCATTTGCCACAATCAGAGGAGCATCACACGAGGCTCCATTTTCACAGCCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCATAAAAGGACGACCTCTTCCACAAGAGTTTTGATATGTCGGTAAAACGTGATTGTTGCATTGTAGTTGAATTCGTTTCACTGTGTTTTAAGTGTAGAAAATTTGTAAAGTGCTCAAGTAAGAAAGGAGGGAATTTGTTTTTTATCTTCTTTGTCACAGTGCCTTGTTTACTTTATTACAGCTGCATTATGTAACTACCCGTTACTGTCTGTTCTTAATCGTGTTAATCAGTAGCATCA 1633 0.4127 MCSLLWSSITMCVALLLHLGIVHPSPSHLRITRLPGQPNVQFHQFSGYVTVDDKTKRALFFYFAEAAKDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVWNPFSWNREANMLYLETPIGVGFSYSTDTSSYEGVNDKVTGKDNLVFLQNWFIKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDSTYKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCLSSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSSLHARLVGVQRWSACSNVLDYDLRDLEIPTIMVVGKLVKEGIPVLVYSGDQDSVIPLTGSRTLVRKMAKELGLKTTVPYRVWFQKQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFIKGRPLPQEF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00433 460 FunFam Carboxypeptidase 24 457 - -
Pste5g00433 460 SUPERFAMILY alpha/beta-Hydrolases 31 457 IPR029058 -
Pste5g00433 460 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Pste5g00433 460 Pfam Serine carboxypeptidase 36 453 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 Gene3D - 355 453 - -
Pste5g00433 460 FunFam Carboxypeptidase 354 453 - -
Pste5g00433 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 440 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Pste5g00433 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Pste5g00433 460 Gene3D - 308 344 - -
Pste5g00433 460 Gene3D alpha/beta hydrolase 27 287 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00433 Pste-Chr5 2863940 2867181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00433 316 456 Calmodulin-binding Proteins AT2G22960 29.078 6.56e-16 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00433 5 2863940 2867181 Pste5g00433 5 2863940 2867181 ECH