Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00431 CCACCATCAAAACCAAGGTTCTTGATTGGATATTATATTATTCTCGGGCACAAGTCTGACGGGAAAACCATTGATTGGCTCCTCCTGCAGGCGGAGCCCTCAATCATCGTGGCCATGAGCATTGGTACCACTCCGGCCACCTTCTCCACGGGGAATACATTCGCCCTGGACACCAAAGACGAGTCCACTACCCCAACCCTCCTTCACCGCACCGACTTTGACCAAGTCTGCAGCTTCACCCTTACACCCGATCTCATTAGGATGATGGAGGCTGGAAATTTCTTGAGCGGTAGGAGTTGGAAAAGGCTAGGCAATGTGTTAGCATTAGATATTAATTTAATGATGTTATTGTGGAAAATGTCATACATTAGATTAAAGCTTGTTGTTGTTGGTGCTTCTGTTTTTCCTTTTCATAATGAT 420 0.4571 PPSKPRFLIGYYIILGHKSDGKTIDWLLLQAEPSIIVAMSIGTTPATFSTGNTFALDTKDESTTPTLLHRTDFDQVCSFTLTPDLIRMMEAGNFLSGRSWKRLGNVLALDINLMMLLWKMSYIRLKLVVVGASVFPFHND 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00431 140 Pfam TCP family transcription factor 15 53 IPR017887 -
Pste5g00431 140 ProSiteProfiles TCP domain profile. 1 38 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00431 Pste-Chr5 2848455 2849327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00431 15 74 TCP Transcription Factor Family AT5G23280 52.000 2.77e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste5g00431 TCP 6.8e-08 No_clan