Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00421 ACACGTGTCCAGCCACTACATCATCACCGGGTTTGGTTTCTTGGTTTGTGGAGTGTGTCCAATATGACCATGGTTCCTTCTCAAAACGGGAAACAACAGAACATTAATAGGAGTGGTGATTATGTTATTTACGGTAACACAACAACAAGTAGTGCTATGAACCAGGTTATTGAAGTTGAAGGAGGCTACAATTGCTTATTAGGATCTGATTTTGTGGTGAGGAGGCACATCATGGCTGAGGCTGAAGAATCATCGAGACACACCAACACCAACGAGGAAGCTGAACCTGGTGGTTGTGGTTCCACCTCAAAGGAGGAAGAAGAAGAAGAAGGAGCAAACAACAACAATAATAGCAACAATAACTGGCTTCAATTAAGTATAGGTTTGACAAGCACAAAGCAAGACCGTGATCGAACCGTTCCAACAGCAACCGGTTCAGGGCTTGTGGAGTTAGACTTGCTTCCTTCACGACGGAGCACGGAGCAGCCGCCGGCTATTTTTCCGACGGTGGCTTCAGGAAGAGGAGGAGGGTCTAGTTTTGGTGGTTCTTCTTCTTTGCTTTTTGAGCATCAAACGACGTCGTCTTCTTCCATGTCCATGTCTATGGCAAGTGGTCCAATTACCTCAACCTTTGGTCATCAGGAGATGATGAACTGGGCATTTGGTCCACTGCTTCCTCCTTCTGTGCCTATTATGCCCTCTTCTTCATCCTTCACTCCTCTTCCTCCTCCTTCTTCTTCTTCTTCCTCATCACAAACTTGTTACTCTTCTTTGAGACCTTCCATAGGATCTTACTTCCCCACACCCTTTCATCACTTCCCTTCTTCTTCTTCTACTGGGTTTGATCAGTATGACATGGCTGCAGCTGGACCAAGCTCAGCTGTCACGGTTCGAGTTGTTGATCCTCCTAGAAGACCCCATTCTGGAGTATGGTTTATGTTACAAGCCTCTCAAAATCAAGCCAAAGAACCATTCTTGCCCCAAATACCTAAGAACTACCTTAGAATTAAGGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCAGAGATAGAGATAAGATGCAGAGGGGAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATATGGAGTCGGAGGGACAACACAAGAGCTTTGCTTTCAGATTCCTCAACCGCAGATCATGTAATGGTTCTCCATTACGGTAGAAGCACAGCTTAAGAGTTAAGAGGACCCACCCCAATATGCATGCATCTTAATTAATTCTACCCTTGTTAACTTATCTAAGCCCTCTCTCTTTTTTCTTTCTTTTTTTTCAATTTCATTATTATTTCTTCCCCTTTCTTTAATTCACATGGAAAATCACGTCCCCAAAACACTGTTTATTCCAATTAGGGTTTTGGGGTCCGGGGTGGATGAGGAATTGCTTTCAACTGTGCACTCTATCTAATTTTATCCACTAACC 1489 0.4406 TRVQPLHHHRVWFLGLWSVSNMTMVPSQNGKQQNINRSGDYVIYGNTTTSSAMNQVIEVEGGYNCLLGSDFVVRRHIMAEAEESSRHTNTNEEAEPGGCGSTSKEEEEEEGANNNNNSNNNWLQLSIGLTSTKQDRDRTVPTATGSGLVELDLLPSRRSTEQPPAIFPTVASGRGGGSSFGGSSSLLFEHQTTSSSSMSMSMASGPITSTFGHQEMMNWAFGPLLPPSVPIMPSSSSFTPLPPPSSSSSSSQTCYSSLRPSIGSYFPTPFHHFPSSSSTGFDQYDMAAAGPSSAVTVRVVDPPRRPHSGVWFMLQASQNQAKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEIRCRGEQLLPFLTLQHVRDNIWSRRDNTRALLSDSSTADHVMVLHYGRSTA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00421 414 MobiDBLite consensus disorder prediction 82 122 - -
Pste5g00421 414 Gene3D - 304 409 - -
Pste5g00421 414 MobiDBLite consensus disorder prediction 159 178 - -
Pste5g00421 414 PANTHER RING FINGER PROTEIN 22 412 IPR044171 GO:0007275
Pste5g00421 414 MobiDBLite consensus disorder prediction 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00421 Pste-Chr5 2783880 2792521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00421 323 410 C3H Transcription Factor Family AT3G23060 38.462 4.61e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00421 5 2783880 2792521 Pste5g00421 5 2783880 2792521 ECH