Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00412 ATGCGTCACGGTGCGTTGCAGTTGTTGCATGTTAGGGTTCTTCTTTGGAGAATAGTCCATATGGCACCAAGATGGAAAGGAAAAGATGCCAAAGCTAAAAAGGATGCAGAAGCTGAAGCACTCAAGGAACCCATGTCAAAGATTGTATCTCAACTTCAATCTTCTCTAGTCCAATCAGATACCCGTGGATTTCTCTCTGATAACAGTGTACACTTAGCAGTGGGAGAAGAACAACTTGATTTGCTTGACAAAGCTTGCTTTGGTCGACCTGTGAGAACAGTTGAAAAGGACAAACACTGGTTTCAATTAAGCTTCGAGGAGGCATTCTACCTATGTGATTCCTTGAAATGCCTTAAGATTAATGGCAGTGATACTGGTCCCCAAAATGAAGAGCTATGGAATTACATGAAGTCCCAGAAAGAAGCATTCCCTTATTTCTACAAGGCTTATTCCCACCTTCGATTGAAAAACTGGGTAGTGAGATCAGGAGCTCAGTATGGTGTAGACTTTGTTGTCTATCGTCATCATCCAGGTCGTGTCCATTCTGAGTATGGTGTGCTTGTTTTATCAGATGAGGATGATAAAGATCTAAATGGAAGACTGGAAGTATGGTCTGATTTTCATTGCACTACTCGACTTCTTGGAAGTGTTGCAAAATTCTTATTGGTTTTATATGTCAATAAAAATGGTAATGGTAACGAGTCTCCTTTATGTTTGTCAAACTATACCGTTGAAGAACGCACAATCACGAGATGGAGTCCAGAACAGAGTCGTGAAAAGATGTAATTCTTGCTAAGATTGATATAAGAACCAGGTAATACTACTGAACGTATGTTTCCAACACGTCTTGCTATGTTTTCATGTCAGACTTAGAGATAACACCCAAACTATTTATTGAGAGTAGCTTCTGCCTTGATGTGGATCCAGTGTTGGCAAGCATGTTTCTAAGCATGTAGTTCATCATATTGATACTGCTGAAGTGCTGATAATATCGAGTAAGAAAGAGAAAATATTTTTTTTGTTGTATTATTGAAGGTTCTCTAAATGCGACCTAACAAAGTAGGAAAGCACACCACCAATATTCCGTTGTTCTTTGTTTTGTTTTTCGGTTTGAGCCTCTCATGAAACAATTTTATGCATGATTTTGTTGGAATTTGAATTAGTACTGCAACTTTTTGAAATGACATTTACCTTTTATAAAAAGGTCAAAATATCCTTATTTCTTCGTAGAAGCAAAAAGAATTGTTTTCCCCTTTTTTCTTTTGTTTTTGCTTCTGCTATTATGACTGGTTTAATAAGGAGAATGGTTTTCTTTTCAACACAGGGAGAAAGCTGAGCAGAGATGTGGCCAAGGTGAAGTTTTATTAGTAATGTGGGTCGTTGTTCCACTAATTAATGGCTTCTTATGCATCCCGAGACTTTCAGAAGGACGCATATAAAATCACTTTGCGAGGTCTTTCTACGTATGAGGTTTTTGGAGAAGCAATTTGTTTTGCTTTTTCAAACATGTATATCTGGAGAAGTAAAAAAAAAATTACTTCTTCAGATTTCAGG 1554 0.3758 MRHGALQLLHVRVLLWRIVHMAPRWKGKDAKAKKDAEAEALKEPMSKIVSQLQSSLVQSDTRGFLSDNSVHLAVGEEQLDLLDKACFGRPVRTVEKDKHWFQLSFEEAFYLCDSLKCLKINGSDTGPQNEELWNYMKSQKEAFPYFYKAYSHLRLKNWVVRSGAQYGVDFVVYRHHPGRVHSEYGVLVLSDEDDKDLNGRLEVWSDFHCTTRLLGSVAKFLLVLYVNKNGNGNESPLCLSNYTVEERTITRWSPEQSREKM 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00412 261 Gene3D - 142 236 IPR011856 GO:0003676
Pste5g00412 261 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 22 93 IPR006676 GO:0000213|GO:0006388
Pste5g00412 261 Pfam tRNA intron endonuclease, N-terminal domain 62 132 IPR006678 GO:0000213|GO:0006388
Pste5g00412 261 Pfam tRNA intron endonuclease, catalytic C-terminal domain 147 231 IPR006677 GO:0000213|GO:0006388
Pste5g00412 261 CDD tRNA-intron_lyase_C 147 231 IPR006677 GO:0000213|GO:0006388
Pste5g00412 261 FunFam tRNA-splicing endonuclease subunit Sen2-1 142 238 - -
Pste5g00412 261 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 143 231 IPR036167 GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00412 Pste-Chr5 2722309 2726330 Dispersed