Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00406 CCGCCTCAAAATTCCACCTTAGACCACCCTCTTATTCCAATTAATCTACCCTTATGATAATAAATAAAGCTCAATTTTCACGACACACACTTGTAGAATTTTCGTGCCGTTTACGACACCATGGCCACTTCACTGTATATATATCCCTTTGGACTTTCTTTTCTCTTTCCTCTCTCACATTCGGTGTATGTATCCACTAATTTAGCCACGTTAACATTAAGCGCCGCCCCCACCATTTATATTTCCTCTTCATCTTTTTACCACAACCACTTTTTTCTCTTCCAAAAACTCTCTTCTTCAATTCCCTAACCTACACACTTTTTTTTTCTCTGCCTTATATATAGAGACAAAGAAAATTAAATTGGGTTTTGGGTTTGGTTTGGTTTGATTTCGATGGAGAATTATTCCATGTTGTTCCCTTGTCCCAATTCTTCGAGCTACCCGGTTTCAACCAGTGGTGTAGGAAGCTCTCAGCATGGTAATTTTGGTGGTCAAAGCTCCAATGCGTTTCTTGGTCTAAGGGCTAGTAATGAGAGTAGTGATCATGAGAAGAGAGGAGAGGGTGGTGGCATTAATGTGAGTGATGAGTTAGGTGGTTCAGGAACTGATGGTAACAAAAAGAAAGGGGAGAAGAAGGTTAGAAAGCCTAGATATGCTTTTCAAACAAGGAGCCAGGTTGATATTCTTGATGATGGCTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAGAACAACAAGTTTCCAAGGAGCTACTACAGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGCTTAACCAAAGACGAAGGGGTAGTGGTGACTACTTATGAGGGAGTGCACACTCACCCAATTGAGAAAACAACAGATAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGAAGCTGCTTCAATTCTCCACAAAAATTACTGGCACATGATGAATGTCTTCTGCCAGTTACGTCAATTGGGAACTAATTGTAGTACTGTATTAGTTCCCCCCTTTGATACAAAAATAAAATGATGTCAATAGAAGTAAGATCTAGTTTGCCTAAACTCTTCTTAGACAATCTTCTTTTTTTATTTCTTTCTTTCTTTCCTTTTTTTTTTTTGTTTGGAATATTAGGTTAATTATATCGTAAATTCAGCTGTCAAGTTCAGTGCTGCTGAAAATATATACAAGTGAATATCCTTTATTCC 1224 0.3856 MENYSMLFPCPNSSSYPVSTSGVGSSQHGNFGGQSSNAFLGLRASNESSDHEKRGEGGGINVSDELGGSGTDGNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 177
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00406 177 SMART WRKY_cls 98 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g00406 177 Pfam WRKY DNA -binding domain 99 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g00406 177 FunFam WRKY transcription factor 57 84 158 - -
Pste5g00406 177 Gene3D WRKY domain 75 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g00406 177 SUPERFAMILY WRKY DNA-binding domain 90 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g00406 177 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 160 IPR044810 GO:0003700
Pste5g00406 177 MobiDBLite consensus disorder prediction 1 86 - -
Pste5g00406 177 MobiDBLite consensus disorder prediction 1 44 - -
Pste5g00406 177 ProSiteProfiles WRKY domain profile. 93 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste5g00406 Pste-Chr5 2677838 2680096 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00406 39 177 WRKY Transcription Factor Family AT5G13080 65.468 5.29e-59 179
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g00406 WRKY 1.6e-26 CL0274