Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00402 CGGAAAAACAAAACCTGTTCTCAATTGTCACAGCCATTGGTCCAAAGCTACCACCTGACGGTGACGTACCCGCTTTGCACTGCCCTCAAGGATTTCCGCAACAATTCTCCTACCGAAACTTTTGCTTCATCGATTCACTTCTCACTTTTCATGTGCGATTCTCAAGGAGTTGAAGGAGAAAGCTCTGCATCGAGAATCTCGATTCGGTTTTTGTGATTTCACGATTTGATTGCATTTTATTCGCTATACTCGTTTTCAGTTCTGACTCACGCGCTTTTCGACAAGGTTACTATCGCCTAGTCTGATACGCTACTGGATTTTGCGTTGTTTCGATCGAATCAGATTTCATTGCAATCATGACTCAGGTTCTATTTGTATTGTCTCTTTTTCTCGTTTCATTTGTTAGTTTCTGAATCTGGATATCAATTGCCGTGAATTGTGATTTCTGAAATGGTTATGACGATGATGATGTTTGTTTACGATTATGATGATGATTGGCAGGCGGTGGAGGTGCTGAATCGGTACGGGACGGATCTGGTGGGGGAACCGAGGGATTCTGATTCTGAGTGTATGGCGGGTTTCGAGTGCTTTCTGAACATAGTCAGGGCACTGGGAATGGGATCGTGCATCTCGGAGGTTGGGGCCGGTGGTAGTTCCCCTCCTCTACTTCCTTATTCGCCTGAATCCAATATGGATGGTGGGAAGAGGCGAAGGTTGAGGGGTTCCCCTTCCTTTGATTTCAAAGTACCTGGTAGGATGTTCTTGAATGGGTCAAGCGAGGTTGCATCCATGTATTGCAAGCAAGGAAGAAAAGGGACCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGCCATGGACCTTATGGCCACAAAGTTGCAAAGAGAGTTAGGGATTATTTTCCCTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAGAATAGAGATGGACTCAGTGATCATAGCAGTGCCACAGGAAGTTATAAATCTGAGGGGAATGGATTTAGATTGGTGGATGAGAAAACTAGTCCCACTGATCATGAACTTGATGAAACATATACTATTTTGACATTAAGAGAATCTTTTTTGAAGGCTTGTAAGATTATGGACAAAGAACTGAAACTACATCCTGATATTGACTGCTTCTGTAGTGGGACTACTGCAGTTACCTTGGTCAAGCAAGGGATGGACCTGGTTATTGGAAATGTTGGGGACTCCAGAGCTGTATTGGGCACCCGAGATCTTGATGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTTAAACCAAATCTTCCAAGTACCTTTCTTTCTCTTTGCTTCTTCCTTGTGTGGGAAGAAGAGAGGATCAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTTTGGCTGCCTAACTCAGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGATTTTTGCCTTAAGGACTTTGGATTGATTGCTGTTCCAGATATCTCATATCACCGCGTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGAGCACTGGTTGAGTCAGCTGTCCAAGCATGGAGGACAAAATATCCTTTTTGTAAGGTTGATGATTGTGCGGCGGTTTGCCTCTTCTTTGATTCAGATTCAGATTTCAAGTCAACAGATACCAAAGCCAAGTTGATACCAGAGACATCTATTAACCAATCCGAGCAGTTATCTTTACTTGATGAAAAGGGAAATGGAACGGAAGCTGAAAAACAGAAGCAATAGCTCAAGTTTTGTACCATGTTTCTCCCAAACCTTATGGTTTTATTGAGAAGGTTGGGAAAATTGAGCTGCAAAAGTCAAAAGGGAAAGGGTCATTATTTTGATGATTTTTTCGGTAGTTCTCTGCCAATATTCTTTTCATTATTTATCTTTCGTTTCCTTCGACAACATTTGGGGGCTGGGAAAAGAGGGGGATTACATATATATTTCGTATCTGGAGGAAAAGGGGTACCGGGCTTCTTTTTTTCGCTGGAGGTCATTTTCCTTCTCTGTATATTTAGTAGATTTGGAGTTTTTGTAAATCCAAGTCTCTAGATTCATATTATGTAGTCTGTTCTGCAATCTGTCGTTTTTCATTTGCATCATTCTTAGGTTCTAGTTTATATTTTCCAGTTTCGTCAGTGAAAAAACATGATAACTGAAAAGAATTGGATTTATTTCTTATGGACTTGAGTCAGGTTTTTGTACTTCCATGTTGTGTTGCTGTAAGAGATTAAATGATATTACCGGTGCGATCCTGTTGTGTGGGA 2420 0.4174 MVMTMMMFVYDYDDDWQAVEVLNRYGTDLVGEPRDSDSECMAGFECFLNIVRALGMGSCISEVGAGGSSPPLLPYSPESNMDGGKRRRLRGSPSFDFKVPGRMFLNGSSEVASMYCKQGRKGTNQDAMLVWENFCSKEDTIFCGVFDGHGPYGHKVAKRVRDYFPLKLNAQWDLHHKNRDGLSDHSSATGSYKSEGNGFRLVDEKTSPTDHELDETYTILTLRESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGMDLVIGNVGDSRAVLGTRDLDDSLIAVQLTIDLKPNLPSTFLSLCFFLVWEEERIRLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHRVTEKDEFVVLATDGIWDVLSNEEVVDIVASAPRSTAARALVESAVQAWRTKYPFCKVDDCAAVCLFFDSDSDFKSTDTKAKLIPETSINQSEQLSLLDEKGNGTEAEKQKQ 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00402 480 Pfam Protein phosphatase 2C 221 414 IPR001932 -
Pste5g00402 480 Gene3D - 106 445 IPR036457 -
Pste5g00402 480 PANTHER PROTEIN PHOSPHATASE 96 434 IPR015655 GO:0004722|GO:0006470
Pste5g00402 480 MobiDBLite consensus disorder prediction 71 90 - -
Pste5g00402 480 SMART PP2C_4 105 434 IPR001932 -
Pste5g00402 480 MobiDBLite consensus disorder prediction 461 480 - -
Pste5g00402 480 ProSiteProfiles PPM-type phosphatase domain profile. 111 436 IPR001932 -
Pste5g00402 480 CDD PP2Cc 111 436 IPR001932 -
Pste5g00402 480 SUPERFAMILY PP2C-like 108 437 IPR036457 -
Pste5g00402 480 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00402 Pste-Chr5 2651354 2658239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00402 84 440 PP2C-type Phosphatase Gene Family AT1G16220 59.189 8.87e-148 429