Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00398 GACCATGATGAGGTTTTGCACGTAAAAATGCAAGCTTTTTTCTTTCCAGCCCATCACAAGCTCCAGTGATATCTCTAGACATAGTTGACATTCCCACACTTAAACACTGATATATAGAAACCGTTGTTGGAAACAACTCAAAGCAAGTTGTTTTGAAGACACCAAGCTAATGGCTACTCCTACATTCTGTATATACCTATTCCTTCTCTCTGTGTCTGTTTCAATCTTGAATCTTAGTTCATCTTCATCAGAGGGAGACATGCTTCTCTCCTTTAAGGCCTCCATTGAAGACTCCAAGAAGGCCTTGTCTAGCTGGTCCAACACTTCATCAAACCACCACTGTAACTGGACTGGAATCACCTGCTCCACCAATCCTTCACTCTCAGTAACTTCTATCAACCTTCAGAGCTTAAACCTTTCTGGGGATATCTCATCTTCTATATGTGACCTTCCAAATCTGTCTTATCTCAACCTTGCTGGTAATGTCTTCAACCAGCCCATCCCTCTTCATCTTTCTCAGTGTAGTTCCTTGGAGACCTTGAATCTCAGTACCAACCTCATATGGGGCACTATCCCATCTCAGATTTCTCAGTTTGCTTCATTGAGAGTGCTTGATTTGAGCAGCAACCACATAGAGGGAAACATCCCTGAAAGCTTAGGCTCCTTGAAGAGCCTCCAAGTCCTCAACATGGGAAGCAACTTGCTTTCAGGTAGTGTACCTGCTGTCTTCGGCAATCTTACTAAACTTGAAGTCCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCTGTGGATATTGGTGAGCTTGGAAATCTTAAGCAACTTCTTTTGCAAAGCTCTTCTTTTCAAGGTGAAATTCCAGATTCCCTGGTGGGCCTGTTTAGTTTGACCCATTTGGATCTCTCAGAGAACAACCTAACAGGTGGGGTTCCAAAGGCTCTATCATCTTCTCTCAAGAACCTCGTTTCATTAGATGTTTCACAAAACAAACTTTTGGGGCCATTTCCAACTGACATCTGCAAAGGACAAGGTCTAATACACCTCAGTCTCCACACGAATGCCTTCACTGGTTCAATCCCCAACTCCATCGGTGAATGTAAGAGTCTTGAGAGATTCCAAGTCCAGAACAATGCTTTCTCTGGAGTTTTCCCCATTGCATTGTGGTCAATGCCCAAAATTAAGCTCATTAGAGCTGAAAACAACAGATTCTCAGGACAGATACCTGAGTCAATTTCAGGAGCTGTTCAGTTGGAGCAAGTTCAACTTGACAACAACAGTTTTGCTGGTAAAATTCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATATAGATTTTCTGCTTCTCTCAATCGTTTCTATGGTGAACTTCCTCCAAATTTTTGTGACTCTCCTGTTATGAGCATAGTAAATCTCTCCCGCAATTCTCTTTCTGGTAAAATCCCAGAGTTGAAAAAATGCAGGAAACTAGTTTCATTGTCTTTGGCTGATAACAGTCTAACAGGAGAAATACCCCCTTCTCTTGCTGAGTTACCTGTGCTCACCTATCTTGATCTCTCAGATAACAATCTCACTGGTTCAATCCCACAAGGGCTTCAGAACTTGAAGCTTGCCCTTTTCAATGTTTCCTTCAATCATCTATCAGGTAAAGTACCATACTCCTTGATTTCAGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGGTCTTTGTGGCCCTGGACTGCCCAACTCCTGCTCTGATGACATGCCAAAACACCATATTGGTAGCGTTACAACCTTAGCATGTGTGCTCATCTTTTTCGCCTTTGTTTCTGGAACTGCGATGATTGTTGGTGGAGTTATTTTTTATAGGAGATATTGCAAGGGGAATCAAGTAGGGGTTTGGCGCTCAGTGTTTTTCTATCCTCTCAGAATTACTGAGCATGATCTACTGGTAGGGATGAATGAAAAAAGTTCAATGGGAAATGGTGGGGTTTTTGGTAAGGTTTATGTTGTGAGTTTACCTAGTGGTGAACTAGTAGCTGTGAAGAAATTGGTTAATTTTGGAAACCAGTCCTCAAAAAGTTTGAAGGCTGAGGTAAAGACTTTGGCAAAAATTAGGCATAAGAATGTTGTTAAAATTTTGGGTTTCTGCCACTCTGATGAGTCAGTGTTTCTCATTTATGAGTACTTGCATGGAGGGAGCTTAGGGGATTTGATTTCTCATCAGAATTTTCAGTTGCAGTGGGGAATTCGATTAAGAATTGCCATTGGAGTTGCTCAAGGACTGGCATATCTCCACAAGGATTATGTCCCTCACTTGCATCACAGAAATGTCAAGTCAAGTAACATTTTGTTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAGTTGTGGGAGAAGCTTCATTTCAATCAATTTTGAACTCTGAAGCAGCATCTTCATGTTACATTGCACCAGAAAATGGTTACAGTAAAAAAGCAACTGAACAAGTGGATATCTACAGTTTTGGTGTGGTATTGCTGGAGCTAGTGAGTGGCAGGCAAGCAGAGAAAACAGAGTCAAGTGATTCACTGGATATTGTGAAGTGGGTTAGAAGGAAAGTGAATATCACCAATGGGGTACATCAGGTTCTTGACCCTAAAATATCACACACTTGTCACCAAGAAATGATTGGAGCTTTAGATATTGCACTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCTTGCATGGTAGAAGTTGTTAGAGGCCTCCAATCCCTGGAGTCAAGAACTTGCATTACAAATTTACATGAACCAAATGAGGAACCCTCCATTCCAGTCTGAACCTCTAAAGTTCCAACTCAAAGGCTACCTTGTTTTTTTTTCAGTCTTTGTATGTAAATTATAAGCATTGTATTTGACATAATTTTTGTTTTGTTTTTTTCCAATGTGATGATTTGAGATATAGGAATCGTTTGAGGGCATGATACATTCTCTGTTGGCATTGGATTCCAAGTGTTAATGATCTTGAGGAGTACCATCACGTATCTGTTTAGGCACAAACTTTTATCAAACTAATGTCATGCATGATGCATCTGTCAAACTATCTGGCCATAACTGTATAAAAACAAGTGAAGATTTTTGTAATGCCGAAAGAACGAGTTGACAG 3149 0.4109 MATPTFCIYLFLLSVSVSILNLSSSSSEGDMLLSFKASIEDSKKALSSWSNTSSNHHCNWTGITCSTNPSLSVTSINLQSLNLSGDISSSICDLPNLSYLNLAGNVFNQPIPLHLSQCSSLETLNLSTNLIWGTIPSQISQFASLRVLDLSSNHIEGNIPESLGSLKSLQVLNMGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPVDIGELGNLKQLLLQSSSFQGEIPDSLVGLFSLTHLDLSENNLTGGVPKALSSSLKNLVSLDVSQNKLLGPFPTDICKGQGLIHLSLHTNAFTGSIPNSIGECKSLERFQVQNNAFSGVFPIALWSMPKIKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQGLGLVKSLYRFSASLNRFYGELPPNFCDSPVMSIVNLSRNSLSGKIPELKKCRKLVSLSLADNSLTGEIPPSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNHLSGKVPYSLISGLPASFLEGNPGLCGPGLPNSCSDDMPKHHIGSVTTLACVLIFFAFVSGTAMIVGGVIFYRRYCKGNQVGVWRSVFFYPLRITEHDLLVGMNEKSSMGNGGVFGKVYVVSLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISHQNFQLQWGIRLRIAIGVAQGLAYLHKDYVPHLHHRNVKSSNILLDANFEPKLTDFALDRVVGEASFQSILNSEAASSCYIAPENGYSKKATEQVDIYSFGVVLLELVSGRQAEKTESSDSLDIVKWVRRKVNITNGVHQVLDPKISHTCHQEMIGALDIALRCTSVVPEKRPCMVEVVRGLQSLESRTCITNLHEPNEEPSIPV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00398 884 PRINTS Leucine-rich repeat signature 242 255 - -
Pste5g00398 884 PRINTS Leucine-rich repeat signature 264 277 - -
Pste5g00398 884 Gene3D Phosphorylase Kinase; domain 1 587 668 - -
Pste5g00398 884 SUPERFAMILY L domain-like 206 520 - -
Pste5g00398 884 Gene3D Ribonuclease Inhibitor 184 240 IPR032675 -
Pste5g00398 884 FunFam - 587 668 - -
Pste5g00398 884 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Pste5g00398 884 Gene3D Transferase(Phosphotransferase) domain 1 669 878 - -
Pste5g00398 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 863 - -
Pste5g00398 884 ProSiteProfiles Leucine-rich repeat profile. 144 167 IPR001611 GO:0005515
Pste5g00398 884 SUPERFAMILY Protein kinase-like (PK-like) 601 860 IPR011009 -
Pste5g00398 884 Pfam Protein kinase domain 594 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00398 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Pste5g00398 884 Gene3D Ribonuclease Inhibitor 242 526 IPR032675 -
Pste5g00398 884 FunFam Leucine-rich repeat family protein 27 184 - -
Pste5g00398 884 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Pste5g00398 884 SMART LRR_typ_2 264 288 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 166 189 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 94 118 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 142 165 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 455 478 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 190 215 IPR003591 -
Pste5g00398 884 SMART LRR_typ_2 239 262 IPR003591 -
Pste5g00398 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 263 526 - -
Pste5g00398 884 ProSiteProfiles Leucine-rich repeat profile. 457 480 IPR001611 GO:0005515
Pste5g00398 884 SUPERFAMILY L domain-like 26 286 - -
Pste5g00398 884 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Pste5g00398 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Pste5g00398 884 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Pste5g00398 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00398 Pste-Chr5 2616516 2620053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00398 32 864 Receptor kinase-like Gene Family AT5G06940 65.513 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g00398 Pkinase 4.6e-39 CL0016