Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00390 TTTGGACTGTATAACAATTTGCGTCATGTTGTTCCTTCCCAACTTAAGCGAGCCGTCTCCAATTCCGACCGAGAACATCCTCGTCGGACACCAATCAAACCATAGGAATCAACATTCCCAATTTAACCAGAAGCCAACCTCTGCTTCAGTTCCTGGAATTTCCCTGTATCACACATTGTGGCGCTTCCACGCAAGACCGCGAAGCTTGTGATCACGCAAGATTGCATTATAGAGAAGCTTCAAAAGTGTTCGAGTTCGTGAAGGGCTTACTTAAGCAGAGGTGAGCTGATAGTAACCTAAACTGAAGAAGGATGACGCGGATGTGCATGCGACGGAACAACATGATGCACAATTTATGTGCAGTCCAAACACAGTCACATTCTTTGGTCAAACATGTCAAACGAAATCGTGTATTTTACACTTCAACGGTCAAACTACACTATTTCCATCATATTTGGTGGTAATGGCACTCAGCGGCAGAGAAAGCTTGACCCGATTAATCGGCAAACCAAGGCGCTTTCTTCCCAATCGCCACTCTATCCTCTCCGACCTTAACCCTAATCCTAACCCTAACCCTAACCCTAACCCTTATCCTATCCAGGTATCTCTTCTAAATCCATCGCAAGCAGATAAAAATGACGACGTAGAATGCCCTGTTTGTGGCCGCAACCTTCCCGGTGATAACCGTCACATAAACTCTCATCTGGATGCATGTCTCTTCCGCTCCCAATCCCAATCCCAATCCCAACCAAAACCAAGAAAACGAAAGTTCTCCCAACGCACCCTCCTTCAGCTAAACTTCACCCTATCCAATTCAAATTCCGTTCTGCCTCCTCAGAACAACGACTCTGAAGAAGAACAAGTCCCTGAAAAGCTCGAGGCTGAACTTAGTTCTACCAATATTTCCACCTCCTCATCTGAAGCCACGCTTCAAACTTTCATTGTTGGCCGGAAATATGCAGATAACACAGAAGAAATATGTTCTGGAACTCCCATCTCTCTTTTGAGGGACCCTCTAAATGTTAAGGACCCCAATGCTGTCAAGGTTGTTTCTGCAGATTCTGGATCCTGCAAGTCATTAGGTTTTCTCCCCCGTGTCCTAGCACAATACCTATCTCCTCTTATTGACAACTATTGCATTGGATTTCGGGGACATGTCACTTCTGTTCCAAAACTTTCTCATGATATTGTTCCAATTCAGATTATGTGCTTCAGAACATCGGATGGTGAAAGCAAATATGCTGATGAGACCTTTAGATGCTTATGGAATAATGCTCAATGTGTTGTTGAATATGCATTTGCAAGCAGGAATCCTCCTTCATCTGTAAAATATCAGCTGAATTTTTGTCTTATGCTACAAGAAGTGTTAATAAAAAATACTCACCTTCTAACAGAAGATGAGAAAACCTATATGGGTATTAACATTCATGACTCTTATTTTCCTTAA 1447 0.4299 MCSPNTVTFFGQTCQTKSCILHFNGQTTLFPSYLVVMALSGRESLTRLIGKPRRFLPNRHSILSDLNPNPNPNPNPNPYPIQVSLLNPSQADKNDDVECPVCGRNLPGDNRHINSHLDACLFRSQSQSQSQPKPRKRKFSQRTLLQLNFTLSNSNSVLPPQNNDSEEEQVPEKLEAELSSTNISTSSSEATLQTFIVGRKYADNTEEICSGTPISLLRDPLNVKDPNAVKVVSADSGSCKSLGFLPRVLAQYLSPLIDNYCIGFRGHVTSVPKLSHDIVPIQIMCFRTSDGESKYADETFRCLWNNAQCVVEYAFASRNPPSSVKYQLNFCLMLQEVLIKNTHLLTEDEKTYMGINIHDSYFP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00390 363 ProSiteProfiles Zinc finger UBZ4-type profile. 96 125 IPR006642 GO:0003677|GO:0006281
Pste5g00390 363 PANTHER FANCONI-ASSOCIATED NUCLEASE 1 41 170 IPR033315 GO:0004518|GO:0036297
Pste5g00390 363 Gene3D Classic Zinc Finger 93 123 - -
Pste5g00390 363 MobiDBLite consensus disorder prediction 60 82 - -
Pste5g00390 363 MobiDBLite consensus disorder prediction 151 185 - -
Pste5g00390 363 FunFam E3 ubiquitin-protein ligase RAD18 93 124 - -
Pste5g00390 363 SMART c2hc_5 96 121 IPR006642 GO:0003677|GO:0006281
Pste5g00390 363 MobiDBLite consensus disorder prediction 151 165 - -
Pste5g00390 363 Pfam HIRAN domain 191 274 IPR014905 GO:0003676|GO:0008270|GO:0016818
Pste5g00390 363 SMART HIRAN_2 189 287 IPR014905 GO:0003676|GO:0008270|GO:0016818
Pste5g00390 363 Gene3D - 184 301 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00390 188 293 RAD5 or RAD16-like Gene Family AT5G05130 33.333 4.06e-06 47.0