Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00385 ATTCACCGATTATTGGCTTTCTGAATGACCCTTCTCTCACCCCATTTTTGTAAAATATTCTTCTCTCCTTCTCGTGAGCACACATGTAATATCGTTTTCGCTAAGGTAGTATGCATATAGCAGCCAATATAGTTTTCACTTACTATGTTATCCCTAAGAAAAGTAAGCATTAGTCATAGCATAGCTAACTAGTAAAGATAGTCAGATAACTCGGCCTCAGGAAGAGGCAGAAGAAGAAGAATGACGAGTTTTCAGTTTCACTCGAGAGTTTTGAGTTTGCTGATTTCAGTTTCCTATTTGCTGACGTGCCTGGGAAACAATGACGTGCCTGTCCAGTTGAATGATGACGTACTAGGCCTGATTGTCTTCAAATCAGACCTTTATGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGATGATGTCAATCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCGGAGGTCTCATTGGATGGCTTGGGATTATCTGGGAAGATTGGAAGAGGTCTTGAGAAGTTGCAGCATGTAACGGTGTTGTCCCTTTCTCACAACAACTTGAATGGAAGTATTAGTCCCTCACTTACTCTTTCAAATACTCTTCAGAGGCTGAACCTTAGTCATAATGCTCTCTCTGGTTCCATTCCTACTTCTTTTGTGGATATCAGTTCAATCAAATTTCTTGATCTTTCAGAGAATTCATTCTCGGGACCAATCCCTGAGAGTTTTTTTCAGAGCTGCTCTTCTCTTCATCACATTTCTCTAGCTAGGAACATGTTTGAAGGAGCAGTTCCTGGCTCACTGTCTAGATGTTCCTCATTGAATAGCCTTAATCTTTCCAATAATCGTTTTTCTGGTAACGTAGACTTTAGTGGGATTTGGTCACTGAACAGGCTTAGGACTGTGGATCTATCTAACAATGCCTTATCTGGGTCCTTACCTAATGGTATTTCATCCATACATAACTTGAAAGAGATCTTATTACAAGGTAACCAGTTTTCTGGTCCATTATCCACTGATATTGGATTCTGCCTGCACCTTAGTAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAGCTTCCTGAGTCAATTGGGAGGCTTGGTTTTTTGAGCTATTTCAAGGCATCAAATAATATTTTCACCGGTGAATTCCCTCAATGGATTGGAAACATGACCAGTCTGGAGTACCTAGAACTCTCAAACAATCAGTTCACTGGAAGCATCCCACAGTCAATAGGCGAACTGAGATCACTGACTCTTCTGAGTATTTCAAATAACAAGCTTGTTGGGAATATACCATCATCATTAAGTTACTGCACAAAGTTGTCTATGATCAAGCTCAGAGGCAATGGTTTTAACGGTACAATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTTGCCCATAATGAATTGAGAGGCTCAATTCCAGCAGGATCAAGCAAGCTCTTGGAAACTCTCACCAACTTGGATCTTTCAGATAACTATCTAGAAGGAAATATCCCTACAGAAACTGGTCTTCTTTCAAAACTAAGATTTTTGAATCTGTCATGGAATGATCTTCATTCACAGATGCTTCCAGAATTTGGTCTCCTTCAGAATCTGACAGTTTTGGATCTTCGCAACAGTGCCTTGCATGGTTCGGTTCCAGCAGATATATGTGACTCGGGCAATTTAGCTGTCCTCCAGCTAGATGGAAATTCATTGGAAGGGAATATTCCAGACGAGATTGGGAACTGTAGATCTCTTTACTTGCTGAGTTTGTCCCACAACAATTTGACTGGTCCAATTCCAAAGTCCATGTCAAATCTAAACAAACTCAAAATCCTCAAGCTGGAATTCAATGACCTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAGTCTTCTTGCTGTGAACATATCGTACAACAGGCTCACAGGCAGGCTTCCTACAGGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTGGGTCTTTGTTCACCCTTGTTGAAGGGTCCATGTAAGATGAATGTCCCCAAACCGCTAGTGCTTGACCCAAATGCCTATAACAACCAAGTAAGTCCTCAAAGAGAAAGAAACGAATCATCGGTATCTGGCCCGGTACATCACCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTCATTGTCTTAGGAGTGATTGCTGTTAGCTTACTTAATGTTTCTGTAAGGAGAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCCAGCTCTTCAAGATCGGGAAGTCCAGCCACAGGAAAGCTTATTCTGTTTGATTCTCAGTCCTCAACTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAAGCATCCGAGATTGGAGAAGGAGTGTTTGGAACACTCTACAAGGTTCCATTAGGATCACAAGGTAGAGTGGTAGCAATCAAGAAGCTTATATCCTCAAATATAATCCAATATCCAGAAGATTTTGATAGGGAAGTTAGAATCCTAGGGAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGATACTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTTTGCACCAAATAGTAGCTTGCAAGCCAAGCTACATGAAAGGCTTCCCTCAAGTCCTCCTCTTTCTTGGGCTATAAGGTTCAAAATTTTGCTTGGGACAGCAAAGGGGCTTGCCCATTTGCATCATTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATTTTGCTTGATGAAAATTACAATGCAAAAATCTCGGATTTCGGGTTGGCTCGGCTTCTGACAAAGCTGGACAGGCATGTGATGAGCAACAGGTTTCAAAGTGCATTAGGATATGTAGCACCAGAATTAGCATGCCAGAGCTTAAGGGTGAATGAGAAATGTGATGTGTATGGTTTTGGGGTGATGATCCTTGAGCTGGTGACAGGAAGAAGGCCAGTGGAGTATGGAGAAGACAATGTGTTGATACTGAATGACCATGTGAGGGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCAAAGCATGAGTGAGTATCCAGAAGATGAGGTATTGCCTGTTCTGAAGCTTGCAATGGTATGCACCTCTCAAATTCCTTCTAGCAGACCTACTATGGCTGAAGTGGTGCAAATATTGCAGGTCATTAAAACCCCGGTTCCTCAAAGGATGGAAGTGTTTTGATGACGTATGCTTCTCTTCTTAACTAGCTTGACATATAGAAAATCTTTGTTACTATCCAGATTTTTTTCTTTTTCCTCTATGTTCTGTATCTTTTTTAACGTCCTTTGCCATTTGGTTTATGTTGATTGTTCTTTAAGTACGACCTGATTTTCCTACTATAAATGGAAATCACTATAGTGTATGCTACCTGTTGGAGGAAGGTTATAATTAATGGAAAGAAAGAAAAAAAAAGAGTACTAGTCGTGATTGTTTCGCTGTTGGAA 3527 0.4108 MTSFQFHSRVLSLLISVSYLLTCLGNNDVPVQLNDDVLGLIVFKSDLYDPSSYLASWNEDDVNPCSWQFVQCNPESGRVSEVSLDGLGLSGKIGRGLEKLQHVTVLSLSHNNLNGSISPSLTLSNTLQRLNLSHNALSGSIPTSFVDISSIKFLDLSENSFSGPIPESFFQSCSSLHHISLARNMFEGAVPGSLSRCSSLNSLNLSNNRFSGNVDFSGIWSLNRLRTVDLSNNALSGSLPNGISSIHNLKEILLQGNQFSGPLSTDIGFCLHLSRLDFSDNQFSGELPESIGRLGFLSYFKASNNIFTGEFPQWIGNMTSLEYLELSNNQFTGSIPQSIGELRSLTLLSISNNKLVGNIPSSLSYCTKLSMIKLRGNGFNGTIPEGLFGLGLEEIDFAHNELRGSIPAGSSKLLETLTNLDLSDNYLEGNIPTETGLLSKLRFLNLSWNDLHSQMLPEFGLLQNLTVLDLRNSALHGSVPADICDSGNLAVLQLDGNSLEGNIPDEIGNCRSLYLLSLSHNNLTGPIPKSMSNLNKLKILKLEFNDLSGEIPMELGMLQSLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQVSPQRERNESSVSGPVHHHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRRLSFVDNALESMCSSSSRSGSPATGKLILFDSQSSTDWISNPESLLNKASEIGEGVFGTLYKVPLGSQGRVVAIKKLISSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEFAPNSSLQAKLHERLPSSPPLSWAIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENYNAKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDQSMSEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00385 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 798 1002 - -
Pste5g00385 1007 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 194 288 - -
Pste5g00385 1007 ProSitePatterns Protein kinases ATP-binding region signature. 726 750 IPR017441 GO:0005524
Pste5g00385 1007 CDD STKc_IRAK 726 994 - -
Pste5g00385 1007 SUPERFAMILY Protein kinase-like (PK-like) 723 1001 IPR011009 -
Pste5g00385 1007 Gene3D Transferase(Phosphotransferase) domain 1 799 1004 - -
Pste5g00385 1007 Gene3D Ribonuclease Inhibitor 340 610 IPR032675 -
Pste5g00385 1007 Pfam Leucine rich repeat 303 355 IPR001611 GO:0005515
Pste5g00385 1007 Pfam Leucine rich repeat 165 210 IPR001611 GO:0005515
Pste5g00385 1007 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Pste5g00385 1007 Gene3D Ribonuclease Inhibitor 198 269 IPR032675 -
Pste5g00385 1007 Gene3D Ribonuclease Inhibitor 270 339 IPR032675 -
Pste5g00385 1007 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00385 1007 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pste5g00385 1007 ProSiteProfiles Protein kinase domain profile. 720 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00385 1007 SUPERFAMILY RNI-like 142 568 - -
Pste5g00385 1007 FunFam Inactive leucine-rich repeat receptor-like protein kinase 314 607 - -
Pste5g00385 1007 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 36 993 - -
Pste5g00385 1007 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Pste5g00385 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 714 797 - -
Pste5g00385 1007 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Pste5g00385 1007 Gene3D Phosphorylase Kinase; domain 1 703 798 - -
Pste5g00385 1007 SMART LRR_typ_2 222 246 IPR003591 -
Pste5g00385 1007 SMART LRR_typ_2 318 342 IPR003591 -
Pste5g00385 1007 SMART LRR_typ_2 100 125 IPR003591 -
Pste5g00385 1007 SMART LRR_typ_2 462 486 IPR003591 -
Pste5g00385 1007 SMART LRR_typ_2 438 461 IPR003591 -
Pste5g00385 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00385 Pste-Chr5 2547790 2551401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00385 11 1004 Receptor kinase-like Gene Family AT3G28040 63.446 0.0 1247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pste5g00385 Pkinase 1.9e-42 CL0016