Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00381 CGGGAAAAAGAGTAAAGCCCAAATCACATGGCAGGAACAACCCCAACTTTATTGAACAAAATAGACTTTAATTAAACTTTGAATAGCAATTTTATTTTTGATTTTTGATTCAAAACAAATCCCACGAAACAAGTATTTGAATCATTTGTTTCTGCAAAACGAAAATGGCGCAGGAGAAGAAAGCTAGGGTTTCCGATGATGAGGAAATGGAAGTGCAGCATGATCAAACCAGCCTCTACGAGGCTCTTGGCGTGGATAGAGCGGCGTCTCAGCAGGAAATAAAGAAGGCTTACTACAGGTTGGCGTTGCGGCTCCACCCTGATAAGAACCCTGGTGATGAGGAAGCTAAGGAGAAATTTCAGCAACTGCAAAAGGTCATCTCGATTCTCGGGGATGAAGAGAAGCGGACCCTCTATGATCAGACTGGTTGTGTTGATGATGCTAGTATTGCTCTTGTGGATGAAGCAAAGAAGCATGATACGTTGAATTCATATTTGGCTATTTCTGGATATAAAGACCTTGCTGGAGATGTTGTGCAGAATCTTCAAGAGTTCTTCAGAACAATGTACAAGAAGGTCACTGAGGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGTTCAGACTCAGAGAAAAATGATTTGATTGATTTGTACAAGAAATATAAAGGTAACATGAATAGGCTTTTTTGTTCAATGCTCTGTTCAGATCCTAAACTTGATTCACATCGATTCAAGGATATTCTCGAAGAGGCTTTAGCTGCTGGAGTACTAAAGGCAACAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCTGAAACCAAACCGCCCATGGATCCTTTGAGAAGGTGGGAGAAGTCAAATAAGCAGTCAAAAACGGATCTGTGTGCAATGATAGCAAAACGCCAAAATGAGAGGAAAGGCCAGTTTGATTCAATGCTCTCATCTCTAGTTGCAAAATATGGTGGAGATGATATGCCAGAACCCTCTGCAGAAGAGTTTGAAGCTACACGGAGAAAGCTGGAGAGTGGCAGATCCTCTAAAAACTTGAAGCAGTCAAAACGGAAGTGAAAATCATATAATGAAGTGCATAGTTTGTTTATGTGACCTCACGTTTGCTCCTTCTTAGTTATCAAATGTTGGAGTATTTAGCAGAATACTGGGGTGTTGTTTTCAATTTGCAATTTGATGTGACTGGCTATTTTCAAAACTGAGAAGGAACCATTTATTCTGTATAGTGATTGGTAGCTTTTTACCATTTTTTTTATGGATGTTTGTTTCTTTAGCACGAACGATGACATGCTTACAATTAAGTATCCGCTGGTTTTAAATATTAGTGAAATTGATTTAAGTGTTTGAGACCGA 1364 0.3952 MAQEKKARVSDDEEMEVQHDQTSLYEALGVDRAASQQEIKKAYYRLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRTLYDQTGCVDDASIALVDEAKKHDTLNSYLAISGYKDLAGDVVQNLQEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKYKGNMNRLFCSMLCSDPKLDSHRFKDILEEALAAGVLKATKAYQKWAKEVSETKPPMDPLRRWEKSNKQSKTDLCAMIAKRQNERKGQFDSMLSSLVAKYGGDDMPEPSAEEFEATRRKLESGRSSKNLKQSKRK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00381 301 CDD DnaJ 25 77 IPR001623 -
Pste5g00381 301 Gene3D DnaJ domain 5 104 IPR036869 -
Pste5g00381 301 PRINTS DnaJ domain signature 43 58 IPR001623 -
Pste5g00381 301 PRINTS DnaJ domain signature 25 43 IPR001623 -
Pste5g00381 301 PRINTS DnaJ domain signature 60 80 IPR001623 -
Pste5g00381 301 PRINTS DnaJ domain signature 80 99 IPR001623 -
Pste5g00381 301 MobiDBLite consensus disorder prediction 266 301 - -
Pste5g00381 301 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 113 296 IPR042977 -
Pste5g00381 301 SUPERFAMILY Chaperone J-domain 19 95 IPR036869 -
Pste5g00381 301 MobiDBLite consensus disorder prediction 276 294 - -
Pste5g00381 301 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Pste5g00381 301 SMART dnaj_3 22 80 IPR001623 -
Pste5g00381 301 Pfam DnaJ domain 24 85 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00381 Pste-Chr5 2530998 2534524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00381 25 85 C2H2 Transcription Factor Family AT1G74250 39.394 1.66e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00381 5 2530998 2534524 Pste5g00381 5 2530998 2534524 ECH