Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00333 ATGGTCTTGTTATTGGAACCAATTGCCTCATTCAAGTATGGAAAAGGCTTCTACCGTGGGATATCTTATTACTCAAACATGGTCCTTAACACTGTCAAATTCCAAGTTGCTTTGACAAATTTATGGTGCTACATTGTCAAGTTCTTGTGTTTCAGTGTTTGGCCAAGTTGGAATTCAACATCCTTCTCTTTTGGCTTCTTGCTCCATGCTGTTGTCTCAGCTGTGATACCATTGGGTTCCAAACTCTCTGTGGTTGACAATAACTGTTGGATTTCCAACAATGGTGATTTTGCATTTGGGTTCTTTAACATTTCAGATGAACCTAACCAATTTAGTGCTGGCATTCGTTTCAATTCAAAGTCGATACCGAATGACCAACAGAAACTGGTCTGGATTGCTGGAGCTAATGTCAAAGTGGGTAACAGGTCCTATTTCCAACTCACTTCTGAAGGGGAACTGGTCCTGTTTGATTCCTTAAAAGAATCCACTGCATGGAGGAGTGGAGCTGGCAACAGAGCTGTTGTTTCAGCTGCTCTTCATGACAATGGCAATCTTGTTCTGATAGACAGAGAGCAAAATATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTCCTTCCAGGACAGAGTTTATCTGTTTATGAGATACTTCGAGCGACAACCAAGAAACCCCCTTCCAGTTCCTATTCTCTTTACATGAATCCTTCTGGTCAATTGCAGCTTCGATGGGATAGCCATATTGTATATTGGACAAGTGACAACCCTTCTGCTTCAAATCTGACAGCATATCTTACAAGTGGTGGAGCTTTGCAACTTCGAGACCAAAGTTTGAACGCTGTTTGGAGTATTTTTGGAGAAGACCATAATGATTCTGTGAATTATCGATTTCTAAGGCTAGAAATGGATGGCAATCTCCGCTTGTATTCGTGGATTGAAACTTCACAATCATGGAGATCAGTCTGGCAAGCTGTTGAGAATCAGTGCAAAGTCTTTGCAACATGTGGTCAGCGTGGTGTCTGTGTCTTCACTGCTTCAGGTTCTACTGATTGCAGGTGCCCTTTTGAGGTAATTGAGTCTAATCAATGTTTGGTTCGGTATGAACATGAGTGTGAATCTGGATCCAATATGCAAACATATAAGAACACATATTTGTATGGAGTTTATCCTCCTGATGATACAGTTGTTGTAAGTAGTTGGCAGCAATGTCAGCAGTTATGTCTGAATGACACGCAGTGTACAGTTGCAACCTTTTCCAACAATGATAGACCAGAATGCTCTATAAAGAAAACTAAGTATGTTACCGGCTATGCAGATCCATCTCTAAGCTCAACTTCTTTTGTTAAAAGGTGTTCAGGTCCATTTGCTGTAAATCCTAGTCTCACAAAGTCACCTCCACCAAAACTGCCTCTTAGTCTCTGTGTTCCTTGTCTAATGGGAGCAGCCTCAGGAACATTTTTCATCGTTGCCATCCTCCAGCTGGGAATTGTTTTCATCATCTTCAGAAGAAAAAACACCACTATGCGAAATGTCGCGTTAGCTTTCGCAAGCCCAAATCCAAATGGCTTAACTGTGTTCTCCTTATCGGAAATCAAGAGCCTAACTGGGGATATGAGAAATCAAATTGGGCCAAATATGTTCAAGGGTGTGCTACCGAACAATCAGCTTGTTGTAGTTAAAGACCTAAATGCAACCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTATGAAGTTGGGCAACATCCACCATAAAAACCTTGTGAAGCTGGAAGGCTTTTGTTGTGAGTTTGACCATAGAATTTTGGTGTATGAATATGGCAAAAATGGTTCGCTGGATAGTTATATAGATGATTCCACTCGTTGCAAGAGGCTAACTTGGAGGAAGCGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCACACTGGGTGTAGGGAGTTTGTGAGCCATGGGAACTTAAAATGTGGGAATGTCATGTTGGATGAAAACTCAGTGGCCAAGGTGTGCGAATATGGGTTTGCAGTAGTGGAAGGTGAGGCTACATACATTTCAGCTGAGAAGGATGCAGAGGATTTTGGAAAGTTGGTATTAAACTTGCTAACAGGGTGTCAAGATCACAAACAACTTTGTGAGTGGGCTTATACAGAATGGATAGAAGGGAGGGCAGTTAATGTGGTAGATAAAAGAATAGATGGTTTTGTCAATTCAGAGGAACTTGAACGTGCATTAAGAATCTCATTCTGGTGCCTTCAAATGGATGAACATAGAAGACCTTCTATGGAGGAGATAGTGAGAGTATTAGATGGTACATTGAATGTGGATCCACCACCACCACCATTTGTCATGCACAGGCCTTTACAGGAAGATGATTCTCAAGAAAATGGTTCAGAGTAA 2403 0.4141 MVLLLEPIASFKYGKGFYRGISYYSNMVLNTVKFQVALTNLWCYIVKFLCFSVWPSWNSTSFSFGFLLHAVVSAVIPLGSKLSVVDNNCWISNNGDFAFGFFNISDEPNQFSAGIRFNSKSIPNDQQKLVWIAGANVKVGNRSYFQLTSEGELVLFDSLKESTAWRSGAGNRAVVSAALHDNGNLVLIDREQNIIWQSFDTPSDTLLPGQSLSVYEILRATTKKPPSSSYSLYMNPSGQLQLRWDSHIVYWTSDNPSASNLTAYLTSGGALQLRDQSLNAVWSIFGEDHNDSVNYRFLRLEMDGNLRLYSWIETSQSWRSVWQAVENQCKVFATCGQRGVCVFTASGSTDCRCPFEVIESNQCLVRYEHECESGSNMQTYKNTYLYGVYPPDDTVVVSSWQQCQQLCLNDTQCTVATFSNNDRPECSIKKTKYVTGYADPSLSSTSFVKRCSGPFAVNPSLTKSPPPKLPLSLCVPCLMGAASGTFFIVAILQLGIVFIIFRRKNTTMRNVALAFASPNPNGLTVFSLSEIKSLTGDMRNQIGPNMFKGVLPNNQLVVVKDLNATIEERKFRSAVMKLGNIHHKNLVKLEGFCCEFDHRILVYEYGKNGSLDSYIDDSTRCKRLTWRKRVEICSSVAKAICYLHTGCREFVSHGNLKCGNVMLDENSVAKVCEYGFAVVEGEATYISAEKDAEDFGKLVLNLLTGCQDHKQLCEWAYTEWIEGRAVNVVDKRIDGFVNSEELERALRISFWCLQMDEHRRPSMEEIVRVLDGTLNVDPPPPPFVMHRPLQEDDSQENGSE 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00333 800 ProSiteProfiles Protein kinase domain profile. 486 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00333 800 Pfam Protein tyrosine and serine/threonine kinase 553 685 IPR001245 GO:0004672|GO:0006468
Pste5g00333 800 Gene3D Hepatocyte Growth Factor 365 453 - -
Pste5g00333 800 PIRSF SRK 684 800 IPR024171 GO:0004674
Pste5g00333 800 PIRSF SRK 52 689 IPR024171 GO:0004674
Pste5g00333 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 684 778 - -
Pste5g00333 800 Gene3D Phosphorylase Kinase; domain 1 501 605 - -
Pste5g00333 800 Gene3D Transferase(Phosphotransferase) domain 1 607 686 - -
Pste5g00333 800 ProSiteProfiles Bulb-type lectin domain profile. 203 321 IPR001480 -
Pste5g00333 800 Gene3D - 73 201 IPR036426 -
Pste5g00333 800 ProSiteProfiles Bulb-type lectin domain profile. 75 200 IPR001480 -
Pste5g00333 800 SUPERFAMILY Protein kinase-like (PK-like) 547 770 IPR011009 -
Pste5g00333 800 MobiDBLite consensus disorder prediction 779 800 - -
Pste5g00333 800 PANTHER OS07G0415500 PROTEIN 52 784 - -
Pste5g00333 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 502 605 - -
Pste5g00333 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 202 320 - -
Pste5g00333 800 Pfam D-mannose binding lectin 129 214 IPR001480 -
Pste5g00333 800 SMART blect_4 81 202 IPR001480 -
Pste5g00333 800 Gene3D - 202 321 IPR036426 -
Pste5g00333 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 72 201 - -
Pste5g00333 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 606 683 - -
Pste5g00333 800 ProSiteProfiles PAN/Apple domain profile. 371 451 IPR003609 -
Pste5g00333 800 Gene3D Transferase(Phosphotransferase) domain 1 687 778 - -
Pste5g00333 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 135 220 IPR036426 -
Pste5g00333 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 220 320 IPR036426 -
Pste5g00333 800 CDD B_lectin 92 202 IPR001480 -
Pste5g00333 800 Pfam PAN domain 376 451 IPR003609 -
Pste5g00333 800 Pfam S-locus glycoprotein domain 290 353 IPR000858 GO:0048544
Pste5g00333 800 SMART ntp_6 372 450 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00333 Pste-Chr5 2253177 2256091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00333 531 799 Receptor kinase-like Gene Family AT4G23150 31.746 1.54e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste5g00333 PK_Tyr_Ser-Thr 4.9e-19 CL0016