Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00327 AAATACCTTAAAGCACATCGACGCCAGCGTTTGACCGTTAAAATTATATTAAAAAAAAAAACTCTCGGAAAGCCGAAGAAGGAGAAGAAGAAAACGGGAGAAGGTTCACAAATTTCGCGTGCTGCCTCGGGTCACCATACTTTCCTCTCTCCGACTCCGAGCACCGTTTCCGACCTGATAAGGCGTCAAAGGAGACGGCGACGGCGGTGCCGGCCAAGGCCAGGACGACGTCAGATGATGATATCCAGAGGACTGTTCGGGTGGTCCCCGCCGCACGTGCAACCGCTCACGCCAGTTTCGGAGGTATCTGAGCCACCGGAGTCTCCGTCGCCGTACCTTGACCCCGGCGCCGAAACCTCCGCGTCGCAGCAGGTGGAGGCGGAGGAGGAGATGGAGGAACCGGAGGAGATCGAGCCGCCACCCGCCGCAGTTCCGTTTTCGCAGCTCTTCGCATGCGCCGACCGCTTCGATTGGTTCCTCATGAGCGTCGGTTCCGTCGCTGCCGCGGCCCACGGTACCGCGCTCGTCGTTTACTTGCACTACTTCGCGAAGATCATCCACGTGCTGCGGATGGATCCTCCGAACGGCTCGTCGCACGAGCAGTTTCACAGGTTCACCGAGCTTGCTTTAATCATTGTTTATATTGCTGCGGGAGTTTTTCTTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAAATATGTCCAAGTACTACTTAATCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTTATCCAGTCTGCCCTTAGTGAAAAAGTAGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACGTTAGCTACAGGTCCATTTATTGTTGCAGCTGGAGGAATATCAAACATATTCCTCCATAGACTTGCTGAGAATATTCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCATATATAAGGACATTGTATGCATTTACAAATGAAACTTTGGCCAAGTATTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTAGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGATTCTTGGTTATTCATGGAAGAGCTCATGGTGGTGAAATTATAGCAGCTCTTTTTTCTGTAATTCTAAGTGGCCTGGGATTAAATCAAGCAGCGACAAATTTCTACTCATTTGATCAAGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGTCGGTCATCCTCATCTGTTAATCATGATGGCACTGTCCCTGATTCTGTGCAAGGAAATATAGAATTCCGAAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTGCCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCGGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAGTGGCTGAGGAGCCAAATAGGACTAGTCACTCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGAGGGATGCCAACACGGATCAAATTGAAGAGGCGGCTAAAATAGCTCATGCACATACATTTATCAGCTCACTAGAGAAAGGTTATGATACACAGGTTGGCAGGGCTGGTCTATCTTTGACTGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTACTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAAGCTGAGAGGGCTGTTCAGGGGGCTCTGGATCTGCTTATGTTGGGATGCTCAACAATAATAATTGCTCGGAGGCTTAGTCTCATAAAGAATGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTAACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTGCAGTGTTCCAAATTGAGAAGGATTCTTCAAGTCATAGTTTCAAAGAACCATCATCCCCTAAAATGATGAAGTCACCCTCTCTTCAAAGAGTTTCTAATGTATCCCGACCTCCAGATGGTGTCTTTAACTTGCAAGAATCACCAGTCCGAAGCCCACCACCTGAGAAGATGCTTGAAAATGGTCAGGCATTGGATGTAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGACATGAGACTACCAGAGTTACCCAAGATTGATGTTCAGTCTGTGCATCGACAAAAGTCAAATGATTCTGATCCAGAATCTCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCTGTTAAAATGAGAGAAATAAAGGGTGCACGGCATCGAAAACCACCATCACTGCAGAAATTGGCTGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTACAGAATTGATGACACTCATCACCTAGAACTAGAGGTAGACAAGTGGTGCTTGATCATTGGCTGCATGGGTATTGTGACAGTAGTTGCCAACTTTTTACAGCATTTCTATTTTGGCATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGGAATGAAGTGGGATGGTTTGATGACGAGGAAAATAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCCATATTTATACAGGACAGCGCTGCAGTTATTGTTGGTCTTCTCATCGGTGCTTTGCTTCATTGGCGGTTAGCACTCGTGGCTTTTGCAACCCTTCCAATTCTCTGCATTTCAGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCGAGGGGCATCCAGGAAATGCACAGAAAGGCATCTTTGGTTCTAGAAGATGCAGTTAGAAACATTTACACTGTCGTTGCTTTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAATTGAAGAAAATATTTAAGCAGAGCTTTCTTCATGGAATGGCAATTGGTTTTGCATTTGGTTTTTCACAATTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAACGTGGTTACATGGATCCACCAACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCATCATTTGCACTTGTGGAGCCTTTCGGATTGGCTCCTTACATACTTAAACGACGAAAATCTCTCATATCAGTATTTGAAATTATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGCTAAAAAATGTCGACTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCACTGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCTGGGTCCGGAAAGAGCACTATAATATCTTTGATTGAGAGGTTTTATGATCCAGTTGCGGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGCTCTATAATTTGAGATGGTTGAGGAGCCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATTATATACGCAAGGCATAATGCCACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCAGGACAAAAACAGAGAATTGCAATTGCTAGGGTGGTGCTGAAAAATGCCCCTATCTTATTGTTGGACGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCAGAGTGGTGCAAGAGGCTCTAGACACGCTGATAATGGGAAACAAGACCACTATTTTAATAGCTCATAGGGCTGCAATGATGAGGCATGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTGGAGGAGGGCAGTCATGATTCATTGGTAGCAAAAAATGGCTTGTATGTTCGACTGATGCAACCTCATTTTGGTAAGGCTTTGCGGCAGCACCGGCTTGTTTAGGATGGAGTATTTGATGTGAGTAATTACTACTAATGTTGGTACCAACATGGGCATAGTTTCATTTTCTGCTTGAGTTGAATCACTGGTGACTTCGGCTCCTGAAGGTTTTTTTCAAGAATGTCAGGTGGAAATTGTGGATGGCATTGGCAATGACGGGCCATGGATTAGCACCTCGCATTAGTAGGCATAGGAAGAGAATACTGTAGGACAGGTAGATGTGTAGGAATTTAAATATAGGATTTTGGAGTTTGGTTTGTTTGCGAACTTGGGTTGAATTCTTTTGAGGGCAAGCAGCTTAGACTGAGGGTGTTTATCCATGGTATTGACCTGTTTCTCAAGAGTGGAATCAACATAATTCTACTGAGGTGAGGTGATTCTTCTAATCAGCTTAGTCTTCCTT 4840 0.4331 KYLKAHRRQRLTVKIILKKKTLGKPKKEKKKTGEGSQISRAASGHHTFLSPTPSTVSDLIRRQRRRRRRCRPRPGRRQMMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEAEEEMEEPEEIEPPPAAVPFSQLFACADRFDWFLMSVGSVAAAAHGTALVVYLHYFAKIIHVLRMDPPNGSSHEQFHRFTELALIIVYIAAGVFLAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGRAHGGEIIAALFSVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTVPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDANTDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLSLTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGCSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAVFQIEKDSSSHSFKEPSSPKMMKSPSLQRVSNVSRPPDGVFNLQESPVRSPPPEKMLENGQALDVADKEPSIRRQDSFDMRLPELPKIDVQSVHRQKSNDSDPESPVSPLLTSDPKNERSHSQTFSRPHSHSDDVSVKMREIKGARHRKPPSLQKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLELEVDKWCLIIGCMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCISAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFASFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVTGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00327 1479 FunFam ABC transporter B family member 20 1220 1469 - -
Pste5g00327 1479 Gene3D ABC transporter type 1, transmembrane domain 148 738 IPR036640 GO:0005524|GO:0016020
Pste5g00327 1479 FunFam ABC transporter B family member 6 1077 1227 - -
Pste5g00327 1479 Pfam ABC transporter transmembrane region 165 435 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00327 1479 Pfam ABC transporter transmembrane region 912 1177 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00327 1479 FunFam ABC transporter B family member 20 148 486 - -
Pste5g00327 1479 FunFam ABC transporter B family member 20 475 722 - -
Pste5g00327 1479 SUPERFAMILY ABC transporter transmembrane region 894 1215 IPR036640 GO:0005524|GO:0016020
Pste5g00327 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 485 720 IPR003439 GO:0005524
Pste5g00327 1479 MobiDBLite consensus disorder prediction 753 778 - -
Pste5g00327 1479 MobiDBLite consensus disorder prediction 61 76 - -
Pste5g00327 1479 Pfam ABC transporter 506 650 IPR003439 GO:0005524
Pste5g00327 1479 MobiDBLite consensus disorder prediction 36 58 - -
Pste5g00327 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1466 IPR027417 -
Pste5g00327 1479 MobiDBLite consensus disorder prediction 859 875 - -
Pste5g00327 1479 Pfam ABC transporter 1248 1396 IPR003439 GO:0005524
Pste5g00327 1479 MobiDBLite consensus disorder prediction 806 840 - -
Pste5g00327 1479 Gene3D - 1228 1467 IPR027417 -
Pste5g00327 1479 CDD ABC_6TM_Pgp_ABCB1_D2_like 902 1213 - -
Pste5g00327 1479 Gene3D - 475 722 IPR027417 -
Pste5g00327 1479 PANTHER ABC TRANSPORTER B FAMILY 124 919 IPR039421 -
Pste5g00327 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 163 452 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00327 1479 SMART AAA_5 1257 1444 IPR003593 GO:0016887
Pste5g00327 1479 SMART AAA_5 512 828 IPR003593 GO:0016887
Pste5g00327 1479 SUPERFAMILY ABC transporter transmembrane region 149 460 IPR036640 GO:0005524|GO:0016020
Pste5g00327 1479 Gene3D ABC transporter type 1, transmembrane domain 845 1072 IPR036640 GO:0005524|GO:0016020
Pste5g00327 1479 Gene3D ABC transporter type 1, transmembrane domain 1081 1227 IPR036640 GO:0005524|GO:0016020
Pste5g00327 1479 Coils Coil 331 351 - -
Pste5g00327 1479 MobiDBLite consensus disorder prediction 19 139 - -
Pste5g00327 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 719 IPR027417 -
Pste5g00327 1479 MobiDBLite consensus disorder prediction 746 875 - -
Pste5g00327 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g00327 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1230 1467 IPR003439 GO:0005524
Pste5g00327 1479 FunFam ABC transporter B family member 6 847 1075 - -
Pste5g00327 1479 CDD ABC_6TM_Pgp_ABCB1_D1_like 161 460 - -
Pste5g00327 1479 MobiDBLite consensus disorder prediction 841 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00327 Pste-Chr5 2208907 2218738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00327 131 776 Calmodulin-binding Proteins AT2G36910 43.712 3.08e-165 530